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This paper discusses the knowledge integration of clinical information extracted from distributed medical ontology in order to ameliorate a machine learning-based multi-label coding assignment system. The proposed approach is implemented…

Machine Learning · Computer Science 2010-04-09 Phanu Waraporn , Phayung Meesad , Gareth Clayton

Graph-based Cognitive Diagnosis (CD) has attracted much research interest due to its strong ability on inferring students' proficiency levels on knowledge concepts. While graph-based CD models have demonstrated remarkable performance, we…

Computers and Society · Computer Science 2025-01-23 Pengyang Shao , Yonghui Yang , Chen Gao , Lei Chen , Kun Zhang , Chenyi Zhuang , Le Wu , Yong Li , Meng Wang

Automatic medical report generation can greatly reduce the workload of doctors, but it is often unreliable for real-world deployment. Current methods can write formally fluent sentences but may be factually flawed, introducing serious…

Computational Engineering, Finance, and Science · Computer Science 2025-12-03 Yuan Wang , Shujian Gao , Jiaxiang Liu , Songtao Jiang , Haoxiang Xia , Xiaotian Zhang , Zhaolu Kang , Yemin Wang , Zuozhu Liu

Chronic obstructive pulmonary disease (COPD) represents a significant global health burden, where precise severity assessment is particularly critical for effective clinical management in intensive care unit (ICU) settings. This study…

Machine Learning · Computer Science 2025-04-29 Akram Shojaei , Mehdi Delrobaei

The era of big data has made vast amounts of clinical data readily available, particularly in the form of electronic health records (EHRs), which provides unprecedented opportunities for developing data-driven diagnostic tools to enhance…

Machine Learning · Computer Science 2025-03-06 Zekai Wang , Tieming Liu , Bing Yao

Various deep learning algorithms have been developed to analyze different types of clinical data including clinical text classification and extracting information from 'free text' and so on. However, automate the keyword extraction from the…

Computation and Language · Computer Science 2019-10-25 Matthew Tang , Priyanka Gandhi , Md Ahsanul Kabir , Christopher Zou , Jordyn Blakey , Xiao Luo

We show how to learn low-dimensional representations (embeddings) of patient visits from the corresponding electronic health record (EHR) where International Classification of Diseases (ICD) diagnosis codes are removed. We expect that these…

Computers and Society · Computer Science 2018-03-28 Jean-Baptiste Escudié , Alaa Saade , Alice Coucke , Marc Lelarge

This work investigates multiple approaches to Named Entity Recognition (NER) for text in Electronic Health Record (EHR) data. In particular, we look into the application of (i) rule-based, (ii) deep learning and (iii) transfer learning…

Medical report generation is a critical task in healthcare that involves the automatic creation of detailed and accurate descriptions from medical images. Traditionally, this task has been approached as a sequence generation problem,…

Computer Vision and Pattern Recognition · Computer Science 2025-03-27 Yijian Fan , Zhenbang Yang , Rui Liu , Mingjie Li , Xiaojun Chang

Deep-learning-based clinical decision support using structured electronic health records (EHR) has been an active research area for predicting risks of mortality and diseases. Meanwhile, large amounts of narrative clinical notes provide…

Computation and Language · Computer Science 2023-05-10 Weimin Lyu , Xinyu Dong , Rachel Wong , Songzhu Zheng , Kayley Abell-Hart , Fusheng Wang , Chao Chen

Social Determinants of Health correlate with patient outcomes but are rarely captured in structured data. Recent attention has been given to automatically extracting these markers from clinical text to supplement diagnostic systems with…

Machine Learning · Computer Science 2026-01-16 Sharim Khan , Paul Landes , Adam Cross , Jimeng Sun

Building models for health prediction based on Electronic Health Records (EHR) has become an active research area. EHR patient journey data consists of patient time-ordered clinical events/visits from patients. Most existing studies focus…

Machine Learning · Computer Science 2022-07-18 Yuxi Liu , Zhenhao Zhang , Antonio Jimeno Yepes , Flora D. Salim

The classification of clinical notes into specific diagnostic categories is critical in healthcare, especially for mental health conditions like Anxiety and Adjustment Disorder. In this study, we compare the performance of various…

The increase in availability of longitudinal electronic health record (EHR) data is leading to improved understanding of diseases and discovery of novel phenotypes. The majority of clustering algorithms focus only on patient trajectories,…

Machine Learning · Computer Science 2021-11-12 Oliver Carr , Avelino Javer , Patrick Rockenschaub , Owen Parsons , Robert Dürichen

Text classification with hierarchical labels is a prevalent and challenging task in natural language processing. Examples include assigning ICD codes to patient records, tagging patents into IPC classes, assigning EUROVOC descriptors to…

Computation and Language · Computer Science 2024-12-18 Nan Li , Bo Kang , Tijl De Bie

Accurate mortality prediction allows Intensive Care Units (ICUs) to adequately benchmark clinical practice and identify patients with unexpected outcomes. Traditionally, simple statistical models have been used to assess patient death risk,…

Machine Learning · Computer Science 2020-05-20 William Caicedo-Torres , Jairo Gutierrez

The recent success of machine learning methods applied to time series collected from Intensive Care Units (ICU) exposes the lack of standardized machine learning benchmarks for developing and comparing such methods. While raw datasets, such…

Machine Learning · Computer Science 2022-01-19 Hugo Yèche , Rita Kuznetsova , Marc Zimmermann , Matthias Hüser , Xinrui Lyu , Martin Faltys , Gunnar Rätsch

We investigate the automatic classification of patient discharge notes into standard disease labels. We find that Convolutional Neural Networks with Attention outperform previous algorithms used in this task, and suggest further areas for…

Machine Learning · Computer Science 2018-02-02 Amitabha Karmakar

Automated clinical risk prediction from electronic health records (EHRs) demands modeling both structured diagnostic codes and unstructured narrative notes. However, most prior approaches either handle these modalities separately or rely on…

Computation and Language · Computer Science 2025-09-26 Xin Zhang , Qiyu Wei , Yingjie Zhu , Fanyi Wu , Sophia Ananiadou

The advent of large language models (LLMs) has opened new avenues for analyzing complex, unstructured data, particularly within the medical domain. Electronic Health Records (EHRs) contain a wealth of information in various formats,…

Information Retrieval · Computer Science 2025-06-10 Wu Hao Ran , Xi Xi , Furong Li , Jingyi Lu , Jian Jiang , Hui Huang , Yuzhuan Zhang , Shi Li