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Heterogeneous distribution of passive and active domains in the chromosome plays a crucial role for its dynamic organization within the cell nucleus. Motivated by that here we investigate the steady-state conformation and dynamics of a…

Soft Condensed Matter · Physics 2024-09-27 Suman Majumder , Subhajit Paul

Confinement can have a dramatic effect on the behavior of all sorts of particulate systems and it therefore is an important phenomenon in many different areas of physics and technology. Here, we investigate the role played by the softness…

We have carried out molecular dynamics simulations of the crystallization of hard spheres modelling colloidal systems that are studied in conventional and space-based experiments. We use microscopic probes to investigate the effects of…

Condensed Matter · Physics 2009-11-07 Igor Volkov , Marek Cieplak , Joel Koplik , Jayanth R. Banavar

Hypothesis: A broad range of phenomena, such as emulsification and emulsion stability, foam formation or liquid evaporation, are closely related to the dynamics of adsorbing colloidal particles. Elucidation of the mechanisms implied is key…

Soft Condensed Matter · Physics 2022-02-22 J. Martín-Roca , M. Jiménez , F. Ortega , C. Calero , Ch. Valeriani , R. G. Rubio , F. Martínez-Pedrero

From understanding the sand on the beach to the foam on your beer, soft sphere simulations have been crucial to the study of the amorphous world around us. However, many of the materials we interact with on a daily basis aren't comprised of…

Soft Condensed Matter · Physics 2024-03-18 R. C. Dennis

In this work the systems composed of particles interacting with hard potential are investigated. These systems feature certain modifications to the crystal structure - selected particles are replaced with ones that differ slightly in their…

Computational Physics · Physics 2024-02-01 Jakub Narojczyk

The dynamics of star polymers has been investigated via extensive Molecular- and Brownian Dynamics simulations for a large range of functionality $f$ and packing fraction $\eta$. The calculated isodiffusivity curves display both minima and…

Soft Condensed Matter · Physics 2009-11-10 G. Foffi , F. Sciortino , P. Tartaglia , E. Zaccarelli , F. Lo Verso , L. Reatto , K . A. Dawson , C. N. Likos

Active matter exhibits striking behaviour reminiscent of living matter and molecular fluids, and has promising applications in drug delivery or mixing at the micron scale. Active colloidal systems provide important models with simple and…

Soft Condensed Matter · Physics 2020-10-09 Nariaki Sakaï , C. Patrick Royall

We propose microscopic density functional theory for inhomogeneous star polymers. Our approach is based on fundamental measure theory for hard spheres, and on Wertheim's first- and second-order perturbation theory for the interparticle…

Soft Condensed Matter · Physics 2007-05-23 A. Malijevsky , P. Bryk , S. Sokolowski

Ionic microgel particles in a good solvent swell to an equilibrium size determined by a balance of electrostatic and elastic forces. When crowded, ionic microgels deswell owing to a redistribution of microions inside and outside the…

Soft Condensed Matter · Physics 2020-01-08 Mariano E. Brito , Alan R. Denton , Gerhard Nägele

Star polymers can exhibit a heterogeneous dynamical behavior due to their internal structure. In this work we employ atomistic molecular dynamics simulations to study translational motion in non-entangled polystyrene and poly(ethylene…

Soft Condensed Matter · Physics 2021-02-03 Petra Bačová , Eirini Gkolfi , Laurence G. D. Hawke , Vagelis Harmandaris

We present a rigorous calculation of the dynamical friction force exerted on a spherical massive perturber moving through an infinite homogenous system of field stars. By calculating the shape and mass of the polarization cloud induced by…

Astrophysics · Physics 2009-06-23 O. Esquivel , B. Fuchs

The translocation of biopolymers, such as DNA and proteins, across cellular or nuclear membranes is essential for numerous biological processes. The translocation dynamics are influenced by the properties of the polymers, such as polymer…

Soft Condensed Matter · Physics 2024-07-29 Gokul Upadhyay , Rajeev Kapri , Anil Kumar Dasanna , Abhishek Chaudhuri

Diffusion in coulomb crystals can be important for the structure of neutron star crusts. We determine diffusion constants $D$ from molecular dynamics simulations. We find that $D$ for coulomb crystals with relatively soft-core $1/r$…

Solar and Stellar Astrophysics · Physics 2015-03-19 J. Hughto , A. S. Schneider , C. J. Horowitz , D. K. Berry

It has been conjectured by Bagnold [1] that an assembly of hard non-deformable spheres could behave as a compressible medium when slowly sheared, as the average density of such a system effectively depends on the confining pressure. Here we…

Statistical Mechanics · Physics 2015-06-12 Martin Trulsson , Mehdi Bouzid , Philippe Claudin , Bruno Andreotti

Microgels are often discussed as well-suited model system for soft colloids. In contrast to rigid spheres, the microgel volume and, coupled to this, the volume fraction in dispersion can be manipulated by external stimuli. This behavior is…

The most efficient way to pack equally sized spheres isotropically in 3D is known as the random close packed state, which provides a starting point for many approximations in physics and engineering. However, the particle size distribution…

Soft Condensed Matter · Physics 2010-01-05 Robert S. Farr , Robert D. Groot

Equilibrium adsorption of disk-like particles on patterned adhesive surfaces is studied using Monte Carlo simulations. The surface is represented as a two-dimensional plane with circular adhesive domains arranged either regularly or…

Soft Condensed Matter · Physics 2026-05-05 Nazar Kukarkin , Taras Patsahan

Star formation is intimately linked to the dynamical evolution of molecular clouds. Turbulent fragmentation determines where and when protostellar cores form, and how they contract and grow in mass via accretion from the surrounding cloud…

Astrophysics · Physics 2007-05-23 Ralf Klessen

We have studied the conformational and scaling behaviors of a flexible dendrimer immersed in athermal or good solvents. A self-consistent field theory combined with a pre-averaged excluded volume potential representing the two-body…

Soft Condensed Matter · Physics 2018-08-30 Meng Shi , Yingzi Yang , Feng Qiu
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