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Phylogenetic trees and networks are leaf-labelled graphs used to model evolution. Display graphs are created by identifying common leaf labels in two or more phylogenetic trees or networks. The treewidth of such graphs is bounded as a…

Data Structures and Algorithms · Computer Science 2018-09-05 Remie Janssen , Mark Jones , Steven Kelk , Georgios Stamoulis , Taoyang Wu

We provide the first approximation quality guarantees for the Cuthull-McKee heuristic for reordering symmetric matrices to have low bandwidth, and we provide an algorithm for reconstructing bounded-bandwidth graphs from distance oracles…

Data Structures and Algorithms · Computer Science 2025-07-10 David Eppstein , Michael T. Goodrich , Songyu Liu

We introduce EDB-bounded datalog, a framework for deriving upper bounds on intermediate result sizes and the asymptotic complexity of recursive queries in datalog. We present an algorithm that, given an arbitrary datalog program, constructs…

Databases · Computer Science 2026-03-17 Christian Fattebert , Zhekai Jiang , Christoph Koch , Reinhard Pichler , Qichen Wang

We show that the problem of whether a query is equivalent to a query of tree-width $k$ is decidable, for the class of Unions of Conjunctive Regular Path Queries with two-way navigation (UC2RPQs). A previous result by Barcel\'o, Romero, and…

Logic in Computer Science · Computer Science 2025-03-12 Diego Figueira , Rémi Morvan

We introduce a logic called distance neighborhood logic with acyclicity and connectivity constraints ($\mathsf{A\&C~DN}$ for short) which extends existential $\mathsf{MSO_1}$ with predicates for querying neighborhoods of vertex sets and for…

Data Structures and Algorithms · Computer Science 2022-12-09 Benjamin Bergougnoux , Jan Dreier , Lars Jaffke

This paper investigates the connections between two state of the art classifiers: decision forests (DFs, including decision jungles) and convolutional neural networks (CNNs). Decision forests are computationally efficient thanks to their…

Computer Vision and Pattern Recognition · Computer Science 2016-03-04 Yani Ioannou , Duncan Robertson , Darko Zikic , Peter Kontschieder , Jamie Shotton , Matthew Brown , Antonio Criminisi

Connectivity structure shapes neural computation, but inferring this structure from population recordings is degenerate: multiple connectivity structures can generate identical dynamics. Recent work uses low-rank recurrent neural networks…

Neurons and Cognition · Quantitative Biology 2026-03-30 Timothy Doyeon Kim , Ulises Pereira-Obilinovic , Yiliu Wang , Eric Shea-Brown , Uygar Sümbül

Advancements in computer science and AI lead to the development of larger, more complex knowledge bases. These are susceptible to contradictions, particularly when multiple experts are involved. To ensure integrity during changes,…

Databases · Computer Science 2023-04-21 Stefan Decker

In this paper we provide an extended formulation for the class of constraint satisfaction problems and prove that its size is polynomial for instances whose constraint graph has bounded treewidth. This implies new upper bounds on extension…

Computational Complexity · Computer Science 2015-04-29 Petr Kolman , Martin Koutecký

Query-based open-domain NLP tasks require information synthesis from long and diverse web results. Current approaches extractively select portions of web text as input to Sequence-to-Sequence models using methods such as TF-IDF ranking. We…

Computation and Language · Computer Science 2019-10-21 Angela Fan , Claire Gardent , Chloe Braud , Antoine Bordes

We investigate the complexity of finding a transformation from a given spanning tree in a graph to another given spanning tree in the same graph via a sequence of edge flips. The exchange property of the matroid bases immediately yields…

Data Structures and Algorithms · Computer Science 2022-01-13 Nicolas Bousquet , Takehiro Ito , Yusuke Kobayashi , Haruka Mizuta , Paul Ouvrard , Akira Suzuki , Kunihiro Wasa

While remarkable success has been achieved through diffusion-based 3D generative models for shapes, 4D generative modeling remains challenging due to the complexity of object deformations over time. We propose DNF, a new 4D representation…

Computer Vision and Pattern Recognition · Computer Science 2024-12-09 Xinyi Zhang , Naiqi Li , Angela Dai

Computing many useful properties of Boolean formulas, such as their weighted or unweighted model count, is intractable on general representations. It can become tractable when formulas are expressed in a special form, such as the decision…

Logic in Computer Science · Computer Science 2025-01-23 Randal E. Bryant , Wojciech Nawrocki , Jeremy Avigad , Marijn J. H. Heule

We analyse the power of graph neural networks (GNNs) in terms of Boolean circuit complexity and descriptive complexity. We prove that the graph queries that can be computed by a polynomial-size bounded-depth family of GNNs are exactly those…

Logic in Computer Science · Computer Science 2024-12-11 Martin Grohe

A central computational task in database theory, finite model theory, and computer science at large is the evaluation of a first-order sentence on a finite structure. In the context of this task, the \emph{width} of a sentence, defined as…

Logic in Computer Science · Computer Science 2026-04-22 Hubie Chen , Stefan Mengel

Control-flow graphs (CFGs) of structured programs are well known to exhibit strong sparsity properties. Traditionally, this sparsity has been modeled using graph parameters such as treewidth and pathwidth, enabling the development of faster…

Programming Languages · Computer Science 2026-02-10 Xuran Cai , Amir Goharshady , S Hitarth , Chun Kit Lam

We show that the deterministic decision tree complexity of a (partial) function or relation $f$ lifts to the deterministic parity decision tree (PDT) size complexity of the composed function/relation $f \circ g$ as long as the gadget $g$…

Computational Complexity · Computer Science 2023-10-19 Arkadev Chattopadhyay , Nikhil S. Mande , Swagato Sanyal , Suhail Sherif

We prove the existence of two thresholds regarding the compilability of random 2-CNF formulas to OBDDs. The formulas are drawn from $\mathcal{F}_2(n,\delta n)$, the uniform distribution over all 2-CNFs with $\delta n$ clauses and $n$…

Data Structures and Algorithms · Computer Science 2026-05-20 Alexis de Colnet , Alfons Laarman , Joon Hyung Lee

Not only are Deep Neural Networks (DNNs) black box models, but also we frequently conceptualize them as such. We lack good interpretations of the mechanisms linking inputs to outputs. Therefore, we find it difficult to analyze in…

Machine Learning · Computer Science 2020-06-29 Christopher Snyder , Sriram Vishwanath

The Fourier representation for the uniform distribution over the Boolean cube has found numerous applications in algorithms and complexity analysis. Notably, in learning theory, learnability of Disjunctive Normal Form (DNF) under uniform as…

Data Structures and Algorithms · Computer Science 2025-06-03 Mohsen Heidari , Roni Khardon
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