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We describe a parallelised version of the MOLDY molecular dynamics program. This Fortran code is aimed at systems which may be described by short-range potentials and specifically those which may be addressed with the embedded atom method.…

Materials Science · Physics 2015-05-28 GJ Ackland , K D'Mellow , SL Daraszewicz , DJ Hepburn , M Uhrin , K. Stratford

We present several exact solutions to the coupled nonlinear Gross-Pitaevskii equations which describe the motion of the one-dimensional spin-2 Bose-Einstein condensates. The nonlinear density-density interactions are decoupled by making use…

Quantum Gases · Physics 2015-06-11 Zhi-Hai Zhang , Yong-Kai Liu , Shi-Jie Yang

To accelerate the solution of large eigenvalue problems arising from many-body calculations in nuclear physics on distributed-memory parallel systems equipped with general-purpose Graphic Processing Units (GPUs), we modified a previously…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-02 Pieter Maris , Chao Yang , Dossay Oryspayev , Brandon Cook

Particle-in-Cell (PIC) Monte Carlo (MC) simulations are central to plasma physics but face increasing challenges on heterogeneous HPC systems due to excessive data movement, synchronization overheads, and inefficient utilization of multiple…

The year 2025 marks the 100 and 30 years anniversaries of the discovery of Bose--Einstein condensation and its successful experimental realisation. Inspired by these important research achievements, a conceptually simple approach is…

Numerical Analysis · Mathematics 2026-01-28 Mechthild Thalhammer , Gregor Thalhammer-Thurner

We analytically solve the one-dimensional coupled Gross-Pitaevskii equations which govern the motion of F=1 spinor Bose-Einstein condensates. The nonlinear density-density interactions are decoupled by making use of the unique properties of…

Quantum Gases · Physics 2015-06-04 Zhi-Hai Zhang , Cong Zhang , Shi-Jie Yang , Shiping Feng

We provide analytical three-dimensional bright multi-soliton solutions to the (3+1)-dimensional Gross-Pitaevskii (GP) equation with time and space-dependent potential, time-dependent nonlinearity, and gain/loss. The zigzag propagation trace…

Exactly Solvable and Integrable Systems · Physics 2015-05-20 Zhenya Yan , Chao Hang

We present a numerical scheme for solving the time-independent nonlinear Gross-Pitaevskii equation in two dimensions describing the Bose-Einstein condensate of trapped interacting neutral atoms at zero temperature. The trap potential is…

Statistical Mechanics · Physics 2016-08-31 Sadhan K. Adhikari

In the present paper we consider numerical methods to solve the discrete Schr\"odinger equation with a time dependent Hamiltonian (motivated by problems encountered in the study of spin systems). We will consider both short-range…

Computational Physics · Physics 2018-08-14 N. Auer , L. Einkemmer , P. Kandolf , A. Ostermann

We study certain stationary and time-evolution problems of trapped Bose-Einstein condensates using the numerical solution of the Gross-Pitaevskii equation with both spherical and axial symmetries. We consider time-evolution problems…

Soft Condensed Matter · Physics 2009-11-07 Sadhan K. Adhikari , Paulsamy Muruganandam

An efficient solver for the three dimensional free-space Poisson equation is presented. The underlying numerical method is based on finite Fourier series approximation. While the error of all involved approximations can be fully controlled,…

Computational Physics · Physics 2017-10-18 Lukas Exl

We consider the time-dependent Gross-Pitaevskii equation describing the dynamics of rotating Bose-Einstein condensates and its discretization with the finite element method. We analyze a mass conserving Crank-Nicolson-type discretization…

Numerical Analysis · Mathematics 2016-06-08 Patrick Henning , Axel Målqvist

We present a numerical study of the time-dependent and time-independent Gross-Pitaevskii (GP) equation in two space dimensions, which describes the Bose-Einstein condensate of trapped bosons at ultralow temperature with both attractive and…

Soft Condensed Matter · Physics 2009-10-31 Sadhan K. Adhikari

We extend the Projected Gross Pitaevskii equation formalism of Davis et al. [Phys. Rev. Lett. \bf{87}, 160402 (2001)] to the experimentally relevant case of harmonic potentials. We outline a robust and accurate numerical scheme that can…

Other Condensed Matter · Physics 2015-06-24 P. Blair Blakie , Matthew J. Davis

We present a data-parallel software package for fitting Gaussian Approximation Potentials (GAPs) on multiple nodes using the ScaLAPACK library with MPI and OpenMP. Until now the maximum training set size for GAP models has been limited by…

Materials Science · Physics 2022-11-14 Sascha Klawohn , James R. Kermode , Albert P. Bartók

The MuST package is a computational software designed for ab initio electronic structure calculations for solids. The Locally Self-consistent Multiple Scattering (LSMS) method implemented in MuST allows to perform the electronic structure…

Computational Physics · Physics 2023-09-01 Xiao Liang , Edward Hanna , Derek Simmel , Hang Liu , Yang Wang

We study exact solutions of the quasi-one-dimensional Gross-Pitaevskii (GP) equation with the (space, time)-modulated potential and nonlinearity and the time-dependent gain or loss term in Bose-Einstein condensates. In particular, based on…

Pattern Formation and Solitons · Physics 2017-04-19 Zhenya Yan , Dongmei Jiang

This paper describes and illustrates functionality of the spNNGP R package. The package provides a suite of spatial regression models for Gaussian and non-Gaussian point-referenced outcomes that are spatially indexed. The package implements…

Computation · Statistics 2021-04-16 Andrew O. Finley , Abhirup Datta , Sudipto Banerjee

We derive the time-dependent two-component Gross--Pitaevskii (GP) equation as an effective description of the dynamics of a dilute two-component Bose gas near its ground state, which exhibits a two-component Bose-Einstein condensate, in the…

Mathematical Physics · Physics 2025-06-03 Jacky Chong , Jinyeop Lee , Zhiwei Sun

We present and distribute a parallel finite-element toolbox written in the free software FreeFem for computing the Bogoliubov-de Gennes (BdG) spectrum of stationary solutions to one- and two-component Gross-Pitaevskii (GP) equations, in two…

Quantum Gases · Physics 2024-04-02 Georges Sadaka , Pierre Jolivet , Efstathios G. Charalampidis , Ionut Danaila