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A new family of graphs, {\it entangled networks}, with optimal properties in many respects, is introduced. By definition, their topology is such that optimizes synchronizability for many dynamical processes. These networks are shown to have…

Statistical Mechanics · Physics 2009-11-11 Luca Donetti , Pablo I. Hurtado , Miguel A. Munoz

Symmetries in a network connectivity regulate how the graph's functioning organizes into clustered states. Classical methods for tracing the symmetry group of a network require very high computational costs, and therefore they are of hard,…

Adaptation and Self-Organizing Systems · Physics 2022-01-05 Pitambar Khanra , Subrata Ghosh , Karin Alfaro-Bittner , Prosenjit Kundu , Stefano Boccaletti , Chittaranjan Hens , Pinaki Pal

The analysis of complex networks permeates all sciences, from biology to sociology. A fundamental, unsolved problem is how to characterize the community structure of a network. Here, using both standard and novel benchmarks, we show that…

Molecular Networks · Quantitative Biology 2012-12-24 Rodrigo Aldecoa , Ignacio Marín

In this article, we advance divide-and-conquer strategies for solving the community detection problem in networks. We propose two algorithms which perform clustering on a number of small subgraphs and finally patches the results into a…

Machine Learning · Statistics 2017-08-21 Soumendu Sundar Mukherjee , Purnamrita Sarkar , Peter J. Bickel

Graph Neural Networks (GNNs) are de facto solutions to structural data learning. However, it is susceptible to low-quality and unreliable structure, which has been a norm rather than an exception in real-world graphs. Existing graph…

Machine Learning · Computer Science 2023-03-20 Dongcheng Zou , Hao Peng , Xiang Huang , Renyu Yang , Jianxin Li , Jia Wu , Chunyang Liu , Philip S. Yu

Recent studies uncovered important core/periphery network structures characterizing complex sets of cooperative and competitive interactions between network nodes, be they proteins, cells, species or humans. Better characterization of the…

Physics and Society · Physics 2013-12-03 Peter Csermely , Andras London , Ling-Yun Wu , Brian Uzzi

A main challenge in mining network-based data is finding effective ways to represent or encode graph structures so that it can be efficiently exploited by machine learning algorithms. Several methods have focused in network representation…

Social and Information Networks · Computer Science 2019-03-18 Leonardo Gutiérrez-Gómez , Jean-Charles Delvenne

Understanding the structural complexity and predictability of complex networks is a central challenge in network science. Although recent studies have revealed a relationship between compression-based entropy and link prediction…

Social and Information Networks · Computer Science 2025-10-14 Sebastián Brzovic , Cristóbal Rojas , Andrés Abeliuk

Symmetries are an essential feature of complex networks as they regulate how the graph collective dynamics organizes into clustered states. We here show how to control network symmetries, and how to enforce patterned states of…

Physics and Society · Physics 2020-11-24 L. V. Gambuzza , M. Frasca , F. Sorrentino , L. M. Pecora , S. Boccaletti

This paper introduces a new class of efficient inter connection networks called as M-graphs for large multi-processor systems.The concept of M-matrix and M-graph is an extension of Mn-matrices and Mn-graphs.We analyze these M-graphs…

Information Theory · Computer Science 2007-07-13 R. N. Mohan , P. T. Kulkarni

In Two-Sets Cut-Uncut, we are given an undirected graph $G=(V,E)$ and two terminal sets $S$ and $T$. The task is to find a minimum cut $C$ in $G$ (if there is any) separating $S$ from $T$ under the following ``uncut'' condition. In the…

Data Structures and Algorithms · Computer Science 2024-08-27 Matthias Bentert , Fedor V. Fomin , Fanny Hauser , Saket Saurabh

We propose a theoretical framework that generalizes simple and fast algorithms for hierarchical agglomerative clustering to weighted graphs with both attractive and repulsive interactions between the nodes. This framework defines GASP, a…

Computer Vision and Pattern Recognition · Computer Science 2022-06-06 Alberto Bailoni , Constantin Pape , Nathan Hütsch , Steffen Wolf , Thorsten Beier , Anna Kreshuk , Fred A. Hamprecht

Modern graph or network datasets often contain rich structure that goes beyond simple pairwise connections between nodes. This calls for complex representations that can capture, for instance, edges of different types as well as so-called…

Social and Information Networks · Computer Science 2020-02-19 Ilya Amburg , Nate Veldt , Austin R. Benson

The application of the network approach to the urban case poses several questions in terms of how to deal with metric distances, what kind of graph representation to use, what kind of measures to investigate, how to deepen the correlation…

Other Condensed Matter · Physics 2007-05-23 Sergio Porta , Paolo Crucitti , Vito Latora

Despite the fact that many important problems (including clustering) can be described using hypergraphs, theoretical foundations as well as practical algorithms using hypergraphs are not well developed yet. In this paper, we propose a…

Combinatorics · Mathematics 2020-07-01 Bogumil Kaminski , Valerie Poulin , Pawel Pralat , Przemyslaw Szufel , Francois Theberge

The internal organization of complex networks often has striking consequences on either their response to external perturbations or on their dynamical properties. In addition to small-world and scale-free properties, clustering is the most…

Physics and Society · Physics 2014-05-26 Pol Colomer-de-Simon , Marian Boguna

Comparative graph and network analysis play an important role in both systems biology and pattern recognition, but existing surveys on the topic have historically ignored or underserved one or the other of these fields. We present an…

Social and Information Networks · Computer Science 2019-05-17 Emily Evans , Marissa Graham

We study the problem of testing for community structure in networks using relations between the observed frequencies of small subgraphs. We propose a simple test for the existence of communities based only on the frequencies of three-node…

Methodology · Statistics 2017-10-17 Chao Gao , John Lafferty

Higher-order connectivity patterns such as small induced sub-graphs called graphlets (network motifs) are vital to understand the important components (modules/functional units) governing the configuration and behavior of complex networks.…

Social and Information Networks · Computer Science 2020-09-15 Aldo G. Carranza , Ryan A. Rossi , Anup Rao , Eunyee Koh

In this work, we use the theory of spatial networks to analyze galaxy distributions. The aim is to develop new approaches to study the spatial galaxy environment properties by means of the network parameters. We investigate how each of the…

Cosmology and Nongalactic Astrophysics · Physics 2024-07-03 Evelise Gausmann , Fabricio Ferrari