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Segmentation of the heart in cardiac cine MR is clinically used to quantify cardiac function. We propose a fully automatic method for segmentation and disease classification using cardiac cine MR images. A convolutional neural network (CNN)…

Computer Vision and Pattern Recognition · Computer Science 2017-08-04 Jelmer M. Wolterink , Tim Leiner , Max A. Viergever , Ivana Isgum

Accurate segmentation of the heart is an important step towards evaluating cardiac function. In this paper, we present a fully automated framework for segmentation of the left (LV) and right (RV) ventricular cavities and the myocardium…

Computer Vision and Pattern Recognition · Computer Science 2017-10-11 Christian F. Baumgartner , Lisa M. Koch , Marc Pollefeys , Ender Konukoglu

The morphological structure of left ventricle segmented from cardiac magnetic resonance images can be used to calculate key clinical parameters, and it is of great significance to the accurate and efficient diagnosis of cardiovascular…

Computer Vision and Pattern Recognition · Computer Science 2018-09-28 Han Kang , Defeng Chen

In this paper, we develop a 2D and 3D segmentation pipelines for fully automated cardiac MR image segmentation using Deep Convolutional Neural Networks (CNN). Our models are trained end-to-end from scratch using the ACD Challenge 2017…

Computer Vision and Pattern Recognition · Computer Science 2017-08-01 Jay Patravali , Shubham Jain , Sasank Chilamkurthy

Feature tracking Cardiac Magnetic Resonance (CMR) has recently emerged as an area of interest for quantification of regional cardiac function from balanced, steady state free precession (SSFP) cine sequences. However, currently available…

Computer Vision and Pattern Recognition · Computer Science 2017-04-13 Davis M. Vigneault , Weidi Xie , David A. Bluemke , J. Alison Noble

The segmentation of the left ventricle (LV) from CINE MRI images is essential to infer important clinical parameters. Typically, machine learning algorithms for automated LV segmentation use annotated contours from only two cardiac phases,…

Computer Vision and Pattern Recognition · Computer Science 2018-09-05 Nicoló Savioli , Miguel Silva Vieira , Pablo Lamata , Giovanni Montana

Automated segmentation of individual calf muscle compartments from 3D magnetic resonance (MR) images is essential for developing quantitative biomarkers for muscular disease progression and its prediction. Achieving clinically acceptable…

Image and Video Processing · Electrical Eng. & Systems 2020-12-23 Zhihui Guo , Honghai Zhang , Zhi Chen , Ellen van der Plas , Laurie Gutmann , Daniel Thedens , Peggy Nopoulos , Milan Sonka

Medical image analysis, especially segmenting a specific organ, has an important role in developing clinical decision support systems. In cardiac magnetic resonance (MR) imaging, segmenting the left and right ventricles helps physicians…

Computer Vision and Pattern Recognition · Computer Science 2018-02-23 Mina Nasr-Esfahani , Majid Mohrekesh , Mojtaba Akbari , S. M. Reza Soroushmehr , Ebrahim Nasr-Esfahani , Nader Karimi , Shadrokh Samavi , Kayvan Najarian

Automatic segmentation of left ventricle (LV) myocardium in cardiac short-axis cine MR images acquired on subjects with myocardial infarction is a challenging task, mainly because of the various types of image inhomogeneity caused by the…

Computer Vision and Pattern Recognition · Computer Science 2018-11-16 Dongqing Zhang , Ilknur Icke , Belma Dogdas , Sarayu Parimal , Smita Sampath , Joseph Forbes , Ansuman Bagchi , Chih-Liang Chin , Antong Chen

Non-invasive detection of cardiovascular disorders from radiology scans requires quantitative image analysis of the heart and its substructures. There are well-established measurements that radiologists use for diseases assessment such as…

Machine Learning · Statistics 2017-08-04 Aliasghar Mortazi , Jeremy Burt , Ulas Bagci

Background: Conventional cardiovascular magnetic resonance (CMR) in paediatric and congenital heart disease uses 2D, breath-hold, balanced steady state free precession (bSSFP) cine imaging for assessment of function and cardiac-gated,…

Image and Video Processing · Electrical Eng. & Systems 2025-07-01 Mark Wrobel , Michele Pascale , Tina Yao , Ruaraidh Campbell , Elena Milano , Michael Quail , Jennifer Steeden , Vivek Muthurangu

Deep learning approaches have achieved state-of-the-art performance in cardiac magnetic resonance (CMR) image segmentation. However, most approaches have focused on learning image intensity features for segmentation, whereas the…

Computer Vision and Pattern Recognition · Computer Science 2019-07-16 Jinming Duan , Ghalib Bello , Jo Schlemper , Wenjia Bai , Timothy J W Dawes , Carlo Biffi , Antonio de Marvao , Georgia Doumou , Declan P O'Regan , Daniel Rueckert

Automated cardiac segmentation from magnetic resonance imaging datasets is an essential step in the timely diagnosis and management of cardiac pathologies. We propose to tackle the problem of automated left and right ventricle segmentation…

Computer Vision and Pattern Recognition · Computer Science 2017-04-28 Phi Vu Tran

Deep fully convolutional neural network (FCN) based architectures have shown great potential in medical image segmentation. However, such architectures usually have millions of parameters and inadequate number of training samples leading to…

Computer Vision and Pattern Recognition · Computer Science 2018-01-17 Mahendra Khened , Varghese Alex Kollerathu , Ganapathy Krishnamurthi

Anatomical and biophysical modeling of left atrium (LA) and proximal pulmonary veins (PPVs) is important for clinical management of several cardiac diseases. Magnetic resonance imaging (MRI) allows qualitative assessment of LA and PPVs…

Computer Vision and Pattern Recognition · Computer Science 2017-05-23 Aliasghar Mortazi , Rashed Karim , Kawal Rhode , Jeremy Burt , Ulas Bagci

Automated noninvasive cardiac diagnosis plays a critical role in the early detection of cardiac disorders and cost-effective clinical management. Automated diagnosis involves the automated segmentation and analysis of cardiac images.…

Image and Video Processing · Electrical Eng. & Systems 2025-04-21 Racheal Mukisa , Arvind K. Bansal

In this paper, we introduce a simple, yet powerful pipeline for medical image segmentation that combines Fully Convolutional Networks (FCNs) with Fully Convolutional Residual Networks (FC-ResNets). We propose and examine a design that takes…

Computer Vision and Pattern Recognition · Computer Science 2017-02-20 Michal Drozdzal , Gabriel Chartrand , Eugene Vorontsov , Lisa Di Jorio , An Tang , Adriana Romero , Yoshua Bengio , Chris Pal , Samuel Kadoury

Recent advances in 3D fully convolutional networks (FCN) have made it feasible to produce dense voxel-wise predictions of volumetric images. In this work, we show that a multi-class 3D FCN trained on manually labeled CT scans of several…

Computer Vision and Pattern Recognition · Computer Science 2018-04-13 Holger R. Roth , Hirohisa Oda , Xiangrong Zhou , Natsuki Shimizu , Ying Yang , Yuichiro Hayashi , Masahiro Oda , Michitaka Fujiwara , Kazunari Misawa , Kensaku Mori

Assessment of cardiovascular disease (CVD) with cine magnetic resonance imaging (MRI) has been used to non-invasively evaluate detailed cardiac structure and function. Accurate segmentation of cardiac structures from cine MRI is a crucial…

Image and Video Processing · Electrical Eng. & Systems 2021-07-23 Xiaofeng Liu , Fangxu Xing , Hanna K. Gaggin , Weichung Wang , C. -C. Jay Kuo , Georges El Fakhri , Jonghye Woo

Cardiovascular magnetic resonance (CMR) imaging is a standard imaging modality for assessing cardiovascular diseases (CVDs), the leading cause of death globally. CMR enables accurate quantification of the cardiac chamber volume, ejection…

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