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In classification and forecasting with tabular data, one often utilizes tree-based models. Those can be competitive with deep neural networks on tabular data and, under some conditions, explainable. The explainability depends on the depth…

Machine Learning · Computer Science 2024-06-05 Jiri Nemecek , Tomas Pevny , Jakub Marecek

The issue of data-driven neural network model construction is one of the core problems in the domain of Artificial Intelligence. A standard approach assumes a fixed architecture with trainable weights. A conceptually more advanced…

Machine Learning · Computer Science 2025-07-03 Szymon Świderski , Agnieszka Jastrzębska

The widely-used cross-entropy (CE) loss-based deep networks achieved significant progress w.r.t. the classification accuracy. However, the CE loss can essentially ignore the risk of misclassification which is usually measured by the…

Computer Vision and Pattern Recognition · Computer Science 2021-05-04 Yubin Ge , Site Li , Xuyang Li , Fangfang Fan , Wanqing Xie , Jane You , Xiaofeng Liu

Multiclass neural network classifiers are typically trained using cross-entropy loss but evaluated using metrics derived from the confusion matrix, such as Accuracy, $F_\beta$-Score, and Matthews Correlation Coefficient. This mismatch…

Machine Learning · Computer Science 2025-05-27 Deyuan Li , Taesoo Daniel Lee , Marynel Vázquez , Nathan Tsoi

Phylogenetic trees are a central tool in understanding evolution. They are typically inferred from sequence data, and capture evolutionary relationships through time. It is essential to be able to compare trees from different data sources…

Populations and Evolution · Quantitative Biology 2017-10-31 Michelle Kendall , Caroline Colijn

Machine learning tasks are generally formulated as optimization problems, where one searches for an optimal function within a certain functional space. In practice, parameterized functional spaces are considered, in order to be able to…

Artificial Intelligence · Computer Science 2024-12-13 Manon Verbockhaven , Sylvain Chevallier , Guillaume Charpiat , Théo Rudkiewicz

Cross-entropy loss has long been the standard choice for training deep neural networks, yet it suffers from interpretability limitations, unbounded weight growth, and inefficiencies that can contribute to costly training dynamics. The…

Machine Learning · Computer Science 2026-04-30 Maxwell Miller-Golub , Collin Coil , Kamil Faber , Marcin Pietron , Panpan Zheng , Pasquale Minervini , Roberto Corizzo

Hierarchical models are utilized in a wide variety of problems which are characterized by task hierarchies, where predictions on smaller subtasks are useful for trying to predict a final task. Typically, neural networks are first trained…

Understanding deep neural network (DNN) behavior requires more than evaluating classification accuracy alone; analyzing errors and their predictability is equally crucial. Current evaluation methodologies lack transparency, particularly in…

Computer Vision and Pattern Recognition · Computer Science 2026-01-29 Katarzyna Filus , Michał Romaszewski , Mateusz Żarski

State-of-the-art animal classification models like SpeciesNet provide predictions across thousands of species but use conservative rollup strategies, resulting in many animals labeled at high taxonomic levels rather than species. We present…

Computer Vision and Pattern Recognition · Computer Science 2025-10-17 Hugo Markoff , Jevgenijs Galaktionovs

Deep Metric Learning algorithms aim to learn an efficient embedding space to preserve the similarity relationships among the input data. Whilst these algorithms have achieved significant performance gains across a wide plethora of tasks,…

Computer Vision and Pattern Recognition · Computer Science 2022-09-15 Soumava Kumar Roy , Yan Han , Mehrtash Harandi , Lars Petersson

We describe how hierarchical concepts can be represented in three types of layered neural networks. The aim is to support recognition of the concepts when partial information about the concepts is presented, and also when some of the…

Neural and Evolutionary Computing · Computer Science 2025-03-25 Nancy A. Lynch

Merge trees, a type of topological descriptor, serve to identify and summarize the topological characteristics associated with scalar fields. They present a great potential for the analysis and visualization of time-varying data. First,…

Human-Computer Interaction · Computer Science 2021-08-02 Lin Yan , Talha Bin Masood , Farhan Rasheed , Ingrid Hotz , Bei Wang

Hierarchy is a natural representation of semantic taxonomies, including the ones routinely used in image segmentation. Indeed, recent work on semantic segmentation reports improved accuracy from supervised training leveraging hierarchical…

Computer Vision and Pattern Recognition · Computer Science 2024-04-16 Simon Weber , Barış Zöngür , Nikita Araslanov , Daniel Cremers

The history of deep learning has shown that human-designed problem-specific networks can greatly improve the classification performance of general neural models. In most practical cases, however, choosing the optimal architecture for a…

Machine Learning · Computer Science 2020-09-14 Nicolo Colombo , Yang Gao

Heterogeneous datasets emerge in various machine learning and optimization applications that feature different input sources, types or formats. Most models or methods do not natively tackle heterogeneity. Hence, such datasets are often…

Machine Learning · Statistics 2025-08-25 Edward Hallé-Hannan , Charles Audet , Youssef Diouane , Sébastien Le Digabel , Paul Saves

The minimum height of vertex and edge partition trees are well-studied graph parameters known as, for instance, vertex and edge ranking number. While they are NP-hard to determine in general, linear-time algorithms exist for trees.…

Data Structures and Algorithms · Computer Science 2021-05-26 Svein Høgemo , Benjamin Bergougnoux , Ulrik Brandes , Christophe Paul , Jan Arne Telle

We propose a novel loss function that dynamically rescales the cross entropy based on prediction difficulty regarding a sample. Deep neural network architectures in image classification tasks struggle to disambiguate visually similar…

Computer Vision and Pattern Recognition · Computer Science 2019-09-26 Serim Ryou , Seong-Gyun Jeong , Pietro Perona

This paper introduces a novel parameter estimation method for the probability tables of Bayesian network classifiers (BNCs), using hierarchical Dirichlet processes (HDPs). The main result of this paper is to show that improved parameter…

Machine Learning · Computer Science 2018-05-09 Francois Petitjean , Wray Buntine , Geoffrey I. Webb , Nayyar Zaidi

There is extensive interest in metric learning methods for image retrieval. Many metric learning loss functions focus on learning a correct ranking of training samples, but strongly overfit semantically inconsistent labels and require a…

Machine Learning · Computer Science 2023-06-05 Christopher Liao , Theodoros Tsiligkaridis , Brian Kulis