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A computer simulation has to be fast to be helpful, if it is employed to study the behavior of a multicomponent dynamic system. This paper discusses modeling concepts and algorithmic techniques useful for creating such fast simulations.…

Data Structures and Algorithms · Computer Science 2007-05-23 Boris D. Lubachevsky

Increasing pressures on the environment are generating an ever-increasing need to manage animal and plant populations sustainably, and to protect and rebuild endangered populations. Effective management requires reliable mathematical…

Methodology · Statistics 2009-09-29 Stephen T. Buckland , Ken B. Newman , Carmen Fernández , Len Thomas , John Harwood

The goal of this paper is to explain how to derive the classical Rosenzweig-MacArthur's model by using a model with two groups of predators in which we can separate the vital dynamic and consumption of prey to describe the behavior of the…

Dynamical Systems · Mathematics 2020-02-03 Sze-Bi Hsu , Zhihua Liu , Pierre Magal

We consider a discrete set of individual agents interacting with a continuum. Examples might be a predator facing a huge group of preys, or a few shepherd dogs driving a herd of sheeps. Analytically, these situations can be described…

Analysis of PDEs · Mathematics 2015-05-20 Rinaldo M. Colombo , Magali Lécureux-Mercier

Physical systems that display competitive non-linear dynamics have played a key role in the development of mathematical models of Nature. Important examples include predator-prey models in ecology, biology, consumer-resource models in…

Recent progress in diverse intelligence has shown simple learning capacities below the organism level - single cells and even molecular networks. However, there are still many knowledge gaps around learning capacity above the organism…

Populations and Evolution · Quantitative Biology 2026-05-29 Adrita Samanta , Hananel Hazan , Michael Levin

Preserving biodiversity and ecosystem stability is a challenge that can be pursued through modern statistical mechanics modeling. Here we introduce a variational maximum entropy-based algorithm to evaluate the entropy in a minimal ecosystem…

Biological Physics · Physics 2018-10-17 Mattia Miotto , Lorenzo Monacelli

Modern scientific computational methods are undergoing a transformative change; big data and statistical learning methods now have the potential to outperform the classical first-principles modeling paradigm. This book bridges this…

Data Analysis, Statistics and Probability · Physics 2018-03-22 John Harlim

The main topic of this thesis is the analysis of evolution equations reflecting issues in ecology and population dynamics. In mathematical modelling, the impact of environmental elements and the interaction between species is read into the…

Analysis of PDEs · Mathematics 2021-03-08 Elisa Affili

Predictive human models often need to adapt their parameters online from human data. This raises previously ignored safety-related questions for robots relying on these models such as what the model could learn online and how quickly could…

Robotics · Computer Science 2021-10-01 Andrea Bajcsy , Anand Siththaranjan , Claire J. Tomlin , Anca D. Dragan

Predator prey interactions are one of ecology's central research themes, but with many interdisciplinary implications across the social and natural sciences. Here we consider an often-overlooked species in these interactions, namely…

Populations and Evolution · Quantitative Biology 2024-07-16 Sayantan Nag Chowdhury , Jeet Banerjee , Matjaž Perc , Dibakar Ghosh

An integro-differential model for evolutionary dynamics with mutations is investigated by improving the understanding of its behavior using numerical simulations. The proposed numerical approach can handle also density dependent fitness,…

Populations and Evolution · Quantitative Biology 2020-01-27 A. L. Amadori , M. Briani , R. Natalini

Artificial ecosystems provide an additional experimental tool to support laboratory work, field work, and theoretical development in competitive exclusion research. A novel application of a spatiotemporal agent based model is presented…

Populations and Evolution · Quantitative Biology 2023-06-01 John C. Stevenson

In this work, we investigate the system of three species ecological model involving one predator-prey subsystem coupling with a generalist predator with negative effect on the prey. Without diffusive terms, all global dynamics of its…

Dynamical Systems · Mathematics 2020-04-28 Fanfan Li , Zhenlai Han , Ting-Hui Yang

Large-Scale Multi-Agent Systems (LS-MAS) consist of several autonomous components, interacting in a non-trivial way, so that the emerging behaviour of the ensemble depends on the individual dynamics of the components and their reciprocal…

Systems and Control · Electrical Eng. & Systems 2025-01-03 Andrea Giusti

Declarative modeling uses symbolic expressions to represent models. With such expressions one can formalize high-level mathematical computations on models that would be difficult or impossible to perform directly on a lower-level simulation…

Quantitative Methods · Quantitative Biology 2019-07-02 Eric Mjolsness

Stochastic, spatially extended models for predator-prey interaction display spatio-temporal structures that are not captured by the Lotka-Volterra mean-field rate equations. These spreading activity fronts reflect persistent correlations…

Statistical Mechanics · Physics 2024-05-09 Uwe C. Täuber

This document is due to appear as a chapter of the forthcoming Handbook of Approximate Bayesian Computation (ABC) by S. Sisson, L. Fan, and M. Beaumont. Here we describe some of the circumstances under which statistical ecologists might…

Methodology · Statistics 2015-11-10 Matteo Fasiolo , Simon N. Wood

The transient behavior of an ecosystem with N random interacting species in the presence of a multiplicative noise is analyzed. The multiplicative noise mimics the interaction with the environment. We investigate different asymptotic…

Statistical Mechanics · Physics 2009-11-10 B. Spagnolo , D. Valenti , A. Fiasconaro

In this paper, we study the dynamics of the ratio-dependent type prey-predator model with different free boundaries. The two free boundaries, determined by prey and predator respectively, implying that they may intersect each other as time…

Dynamical Systems · Mathematics 2021-05-13 Lingyu Liu