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In this work, we present a collection of new results on two fundamental problems in geometric data structures: orthogonal point location and rectangle stabbing. -We give the first linear-space data structure that supports 3-d point location…

Computational Geometry · Computer Science 2018-05-23 Timothy M. Chan , Yakov Nekrich , Saladi Rahul , Konstantinos Tsakalidis

Indexing highly repetitive texts - such as genomic databases, software repositories and versioned text collections - has become an important problem since the turn of the millennium. A relevant compressibility measure for repetitive texts…

Data Structures and Algorithms · Computer Science 2020-12-17 Travis Gagie , Gonzalo Navarro , Nicola Prezza

In the Feedback Vertex Set problem, one is given an undirected graph $G$ and an integer $k$, and one needs to determine whether there exists a set of $k$ vertices that intersects all cycles of $G$ (a so-called feedback vertex set). Feedback…

Data Structures and Algorithms · Computer Science 2019-11-04 Jason Li , Jesper Nederlof

Motivation: The comparison of diverse genomic datasets is fundamental to understanding genome biology. Researchers must explore many large datasets of genome intervals (e.g., genes, sequence alignments) to place their experimental results…

Genomics · Quantitative Biology 2012-08-20 Ryan M. Layer , Kevin Skadron , Gabriel Robins , Ira M. Hall , Aaron R. Quinlan

Rank and select data structures seek to preprocess a bit vector to quickly answer two kinds of queries: rank(i) gives the number of 1 bits in slots 0 through i, and select(j) gives the first slot s with rank(s) = j. A succinct data…

Data Structures and Algorithms · Computer Science 2024-05-09 Matthew D. Laws , Jocelyn Bliven , Kit Conklin , Elyes Laalai , Samuel McCauley , Zach S. Sturdevant

We present space-efficient parallel strategies for two fundamental combinatorial search problems, namely, backtrack search and branch-and-bound, both involving the visit of an $n$-node tree of height $h$ under the assumption that a node can…

Data Structures and Algorithms · Computer Science 2014-03-27 Andrea Pietracaprina , Geppino Pucci , Francesco Silvestri , Fabio Vandin

A history-independent data structure does not reveal the history of operations applied to it, only its current logical state, even if its internal state is examined. This paper studies history-independent concurrent dictionaries, in…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-28 Hagit Attiya , Michael A. Bender , Martín Farach-Colton , Rotem Oshman , Noa Schiller

Spatially-coupled (SC) codes, known for their threshold saturation phenomenon and low-latency windowed decoding algorithms, are ideal for streaming applications. They also find application in various data storage systems because of their…

Information Theory · Computer Science 2021-01-26 Siyi Yang , Ahmed Hareedy , Shyam Venkatasubramanian , Robert Calderbank , Lara Dolecek

We consider the following problem: given three sets of real numbers, output a word-RAM data structure from which we can efficiently recover the sign of the sum of any triple of numbers, one in each set. This is similar to a previous work by…

Data Structures and Algorithms · Computer Science 2019-03-08 Sergio Cabello , Jean Cardinal , John Iacono , Stefan Langerman , Pat Morin , Aurélien Ooms

A functional $k$-batch code of dimension $s$ consists of $n$ servers storing linear combinations of $s$ linearly independent information bits. These codes are designed to recover any multiset of $k$ requests, each being a linear combination…

Information Theory · Computer Science 2025-01-23 Lev Yohananov , Isaac Barouch Essayag

Many problems that can be solved in quadratic time have bit-parallel speed-ups with factor $w$, where $w$ is the computer word size. A classic example is computing the edit distance of two strings of length $n$, which can be solved in…

Quantum Physics · Physics 2023-04-17 Massimo Equi , Arianne Meijer - van de Griend , Veli Mäkinen

Dietzfelbinger and Weidling [DW07] proposed a natural variation of cuckoo hashing where each of $cn$ objects is assigned $k = 2$ intervals of size $\ell$ in a linear (or cyclic) hash table of size $n$ and both start points are chosen…

Data Structures and Algorithms · Computer Science 2019-12-18 Stefan Walzer

We revisit Hopcroft's problem and related fundamental problems about geometric range searching. Given $n$ points and $n$ lines in the plane, we show how to count the number of point-line incidence pairs or the number of point-above-line…

Computational Geometry · Computer Science 2022-06-23 Timothy M. Chan , Da Wei Zheng

Spatial objects often come with textual information, such as Points of Interest (POIs) with their descriptions, which are referred to as geo-textual data. To retrieve such data, spatial keyword queries that take into account both spatial…

Databases · Computer Science 2023-04-17 Yufan Sheng , Xin Cao , Yixiang Fang , Kaiqi Zhao , Jianzhong Qi , Gao Cong , Wenjie Zhang

We study quantum algorithms for spatial search on finite dimensional grids. Patel et al. and Falk have proposed algorithms based on a quantum walk without a coin, with different operators applied at even and odd steps. Until now, such…

Quantum Physics · Physics 2015-10-14 Andris Ambainis , Renato Portugal , Nikolay Nahimov

We present a number of new results about range searching for colored (or "categorical") data: 1. For a set of $n$ colored points in three dimensions, we describe randomized data structures with $O(n\mathop{\rm polylog}n)$ space that can…

Data Structures and Algorithms · Computer Science 2020-03-27 Timothy M. Chan , Qizheng He , Yakov Nekrich

Space-filling curves (SFC, also known as FASS-curves) are a useful tool in scientific computing and other areas of computer science to sequentialize multidimensional grids in a cache-efficient and parallelization-friendly way for storage in…

Computational Geometry · Computer Science 2019-11-05 David Holzmüller

Let us consider the Multiple String Matching Problem. In this problem, we consider a long string, denoted by $t$, of length $n$. This string is referred to as a text. We also consider a sequence of $m$ strings, denoted by $S$, which we…

Quantum Physics · Physics 2024-11-25 Kamil Khadiev , Danil Serov

We study a broad class of algorithmic problems with an "additive flavor" such as computing sumsets, 3SUM, Subset Sum and geometric pattern matching. Our starting point is that these problems can often be solved efficiently for integers,…

Data Structures and Algorithms · Computer Science 2024-10-30 Nick Fischer

Permutation patterns and pattern avoidance have been intensively studied in combinatorics and computer science, going back at least to the seminal work of Knuth on stack-sorting (1968). Perhaps the most natural algorithmic question in this…

Data Structures and Algorithms · Computer Science 2019-08-14 Benjamin Aram Berendsohn , László Kozma , Dániel Marx