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Related papers: Static Graph Challenge: Subgraph Isomorphism

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We propose a new graph-theoretic benchmark in this paper. The benchmark is developed to address shortcomings of an existing widely-used graph benchmark. We thoroughly studied a large number of traditional and contemporary graph algorithms…

Performance · Computer Science 2010-05-06 Andy B. Yoo , Yang Liu , Sheila Vaidya , Stephen Poole

The HPEC Graph Challenge is a collection of benchmarks representing complex workloads that test the hardware and software components of HPC systems, which traditional benchmarks, such as LINPACK, do not. The first benchmark, Subgraph…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-05 Siddharth Samsi , Dan Campbell , Emanuel Scoullos , Oded Green

The rise of graph analytic systems has created a need for new ways to measure and compare the capabilities of graph processing systems. The MIT/Amazon/IEEE Graph Challenge has been developed to provide a well-defined community venue for…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-12-17 Siddharth Samsi , Vijay Gadepally , Michael Hurley , Michael Jones , Edward Kao , Sanjeev Mohindra , Paul Monticciolo , Albert Reuther , Steven Smith , William Song , Diane Staheli , Jeremy Kepner

The analysis of graphs has become increasingly important to a wide range of applications. Graph analysis presents a number of unique challenges in the areas of (1) software complexity, (2) data complexity, (3) security, (4) mathematical…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-19 Jeremy Kepner , David Bader , Aydın Buluc , John Gilbert , Timothy Mattson , Henning Meyerhenke

Graph kernels are often used in bioinformatics and network applications to measure the similarity between graphs; therefore, they may be used to construct efficient graph classifiers. Many graph kernels have been developed thus far, but to…

Quantum Physics · Physics 2022-11-01 Kaito Kishi , Takahiko Satoh , Rudy Raymond , Naoki Yamamoto , Yasubumi Sakakibara

Subgraph isomorphism counting is known as #P-complete and requires exponential time to find the accurate solution. Utilizing representation learning has been shown as a promising direction to represent substructures and approximate the…

Machine Learning · Computer Science 2024-05-14 Xin Liu , Weiqi Wang , Jiaxin Bai , Yangqiu Song

Graph-structured data are an integral part of many application domains, including chemoinformatics, computational biology, neuroimaging, and social network analysis. Over the last two decades, numerous graph kernels, i.e. kernel functions…

Machine Learning · Computer Science 2021-03-10 Karsten Borgwardt , Elisabetta Ghisu , Felipe Llinares-López , Leslie O'Bray , Bastian Rieck

Subgraph isomorphism is a well-known NP-hard problem which is widely used in many applications, such as social network analysis and knowledge graph query. Its performance is often limited by the inherent hardness. Several insightful works…

Databases · Computer Science 2021-04-21 Li Zeng , Yan Jiang , Weixin Lu , Lei Zou

The vast amounts of data used in social, business or traffic networks, biology and other natural sciences are often managed in graph-based data sets, consisting of a few thousand up to billions and trillions of vertices and edges,…

Databases · Computer Science 2021-10-22 Matthias Hauck , Ismail Oukid , Holger Fröning

The rise of big data systems has created a need for benchmarks to measure and compare the capabilities of these systems. Big data benchmarks present unique scalability challenges. The supercomputing community has wrestled with these…

Performance · Computer Science 2016-12-13 Patrick Dreher , Chansup Byun , Chris Hill , Vijay Gadepally , Bradley Kuszmaul , Jeremy Kepner

Subgraph counting aims to count the occurrences of a subgraph template T in a given network G. The basic problem of computing structural properties such as counting triangles and other subgraphs has found applications in diverse domains.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-12 Langshi Chen , Jiayu Li , Ariful Azad , Lei Jiang , Madhav Marathe , Anil Vullikanti , Andrey Nikolaev , Egor Smirnov , Ruslan Israfilov , Judy Qiu

One of the major challenges in applications related to social networks, computational biology, collaboration networks etc., is to efficiently search for similar patterns in their underlying graphs. These graphs are typically noisy and…

Social and Information Networks · Computer Science 2015-12-17 Kanigalpula Samanvi , Naveen Sivadasan

Graph analytics elicits insights from large graphs to inform critical decisions for business, safety and security. Several large-scale graph processing frameworks feature efficient runtime systems; however, they often provide programming…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-05-29 Farzin Houshmand , Mohsen Lesani , Keval Vora

Determining whether two graphs are structurally identical is a fundamental problem with applications spanning mathematics, computer science, chemistry, and network science. Despite decades of study, graph isomorphism remains a challenging…

Computational Physics · Physics 2026-04-10 Sara Najem , Amer E. Mouawad

Graph clustering has many important applications in computing, but due to growing sizes of graphs, even traditionally fast clustering methods such as spectral partitioning can be computationally expensive for real-world graphs of interest.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 Julian Shun , Farbod Roosta-Khorasani , Kimon Fountoulakis , Michael W. Mahoney

We propose Slim Graph: the first programming model and framework for practical lossy graph compression that facilitates high-performance approximate graph processing, storage, and analytics. Slim Graph enables the developer to express…

Data Structures and Algorithms · Computer Science 2021-08-04 Maciej Besta , Simon Weber , Lukas Gianinazzi , Robert Gerstenberger , Andrey Ivanov , Yishai Oltchik , Torsten Hoefler

Subgraph queries also known as subgraph isomorphism search is a fundamental problem in querying graph-like structured data. It consists to enumerate the subgraphs of a data graph that match a query graph. This problem arises in many…

Databases · Computer Science 2018-07-11 C. Nabti , T. Mecharnia , S. E. Boukhetta , H. Seba , K. Amrouche

The rapidly growing number of large network analysis problems has led to the emergence of many parallel and distributed graph processing systems---one survey in 2014 identified over 80. Since then, the landscape has evolved; some packages…

Performance · Computer Science 2017-05-18 Samuel Pollard , Boyana Norris

A subgraph is constructed by using a subset of vertices and edges of a given graph. There exist many graph properties that are hereditary for subgraphs. Hence, researchers from different communities have paid a great deal of attention in…

Combinatorics · Mathematics 2023-06-06 Kai Siong Yow , Ningyi Liao , Siqiang Luo , Reynold Cheng , Chenhao Ma , Xiaolin Han

In recent years, kernel methods are widespread in tasks of similarity measuring. Specifically, graph kernels are widely used in fields of bioinformatics, chemistry and financial data analysis. However, existing methods, especially entropy…

Machine Learning · Computer Science 2023-03-27 Chengyu Sun , Xing Ai , Zhihong Zhang , Edwin R Hancock
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