Related papers: The streaming $k$-mismatch problem
The longest common substring with $k$-mismatches problem is to find, given two strings $S_1$ and $S_2$, a longest substring $A_1$ of $S_1$ and $A_2$ of $S_2$ such that the Hamming distance between $A_1$ and $A_2$ is $\le k$. We introduce a…
We consider a class of pattern matching problems where a normalising transformation is applied at every alignment. Normalised pattern matching plays a key role in fields as diverse as image processing and musical information processing…
We present streaming algorithms for the graph $k$-matching problem in both the insert-only and dynamic models. Our algorithms, with space complexity matching the best upper bounds, have optimal or near-optimal update time, significantly…
In this work, we address the problem of approximate pattern matching with wildcards. Given a pattern $P$ of length $m$ containing $D$ wildcards, a text $T$ of length $n$, and an integer $k$, our objective is to identify all fragments of $T$…
In the Longest Common Factor with $k$ Mismatches (LCF$_k$) problem, we are given two strings $X$ and $Y$ of total length $n$, and we are asked to find a pair of maximal-length factors, one of $X$ and the other of $Y$, such that their…
We initiate a broad study of classical problems in the streaming model with insertions and deletions in the setting where we allow the approximation factor $\alpha$ to be much larger than $1$. Such algorithms can use significantly less…
Given strings $P$ of length $m$ and $T$ of length $n$ over an alphabet of size $\sigma$, the string matching with $k$-mismatches problem is to find the positions of all the substrings in $T$ that are at Hamming distance at most $k$ from…
We present an algorithm for the maximum matching problem in dynamic (insertion-deletions) streams with *asymptotically optimal* space complexity: for any $n$-vertex graph, our algorithm with high probability outputs an $\alpha$-approximate…
We consider maximizing a monotone submodular function under a cardinality constraint or a knapsack constraint in the streaming setting. In particular, the elements arrive sequentially and at any point of time, the algorithm has access to…
We provide the first streaming algorithm for computing a provable approximation to the $k$-means of sparse Big data. Here, sparse Big Data is a set of $n$ vectors in $\mathbb{R}^d$, where each vector has $O(1)$ non-zeroes entries, and…
We study the streaming complexity of the membership problem of 1-turn-Dyck2 and Dyck2 when there are a few errors in the input string. 1-turn-Dyck2 with errors: We prove that there exists a randomized one-pass algorithm that given x checks…
A central task in string processing is text indexing, where the goal is to preprocess a text (a string of length $n$) into an efficient index (a data structure) supporting queries about the text. Cole, Gottlieb, and Lewenstein (STOC 2004)…
The distinct elements problem is one of the fundamental problems in streaming algorithms --- given a stream of integers in the range $\{1,\ldots,n\}$, we wish to provide a $(1+\varepsilon)$ approximation to the number of distinct elements…
Two strings are considered to have parameterized matching when there exists a bijection of the parameterized alphabet onto itself such that it transforms one string to another. Parameterized matching has application in software duplication…
The shift distance $\mathsf{sh}(S_1,S_2)$ between two strings $S_1$ and $S_2$ of the same length is defined as the minimum Hamming distance between $S_1$ and any rotation (cyclic shift) of $S_2$. We study the problem of sketching the shift…
We consider the classic Euclidean $k$-median and $k$-means objective on data streams, where the goal is to provide a $(1+\varepsilon)$-approximation to the optimal $k$-median or $k$-means solution, while using as little memory as possible.…
In this paper, we propose a novel framework that converts streaming algorithms for monotone submodular maximization into streaming algorithms for non-monotone submodular maximization. This reduction readily leads to the currently tightest…
Streaming algorithms are generally judged by the quality of their solution, memory footprint, and computational complexity. In this paper, we study the problem of maximizing a monotone submodular function in the streaming setting with a…
The edit distance is a way of quantifying how similar two strings are to one another by counting the minimum number of character insertions, deletions, and substitutions required to transform one string into the other. In this paper we…
Many real-world applications pose challenges in incorporating fairness constraints into the $k$-center clustering problem, where the dataset consists of $m$ demographic groups, each with a specified upper bound on the number of centers to…