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Dimensionality reduction techniques are powerful tools for data preprocessing and visualization which typically come with few guarantees concerning the topological correctness of an embedding. The interleaving distance between the…

Machine Learning · Computer Science 2022-02-01 Bradley J. Nelson , Yuan Luo

Boissonnat and Pritam introduced an algorithm to reduce a filtration of flag (or clique) complexes, which can in particular speed up the computation of its persistent homology. They used so-called edge collapse to reduce the input flag…

Computational Geometry · Computer Science 2022-03-15 Marc Glisse , Siddharth Pritam

Multi-parameter persistent homology is a recent branch of topological data analysis. In this area, data sets are investigated through the lens of homology with respect to two or more scale parameters. The high computational cost of many…

Algebraic Topology · Mathematics 2020-10-30 Michael Kerber , Alexander Rolle

Reduction operations are extensively employed in many computational problems. A reduction consists of, given a finite set of numeric elements, combining into a single value all elements in that set, using for this a combiner function. A…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-10-23 Walid Jradi , Hugo do Nascimento , Wellington Martins

Modern parallel computing devices, such as the graphics processing unit (GPU), have gained significant traction in scientific and statistical computing. They are particularly well-suited to data-parallel algorithms such as the particle…

Computation · Statistics 2015-06-12 Lawrence M. Murray , Anthony Lee , Pierre E. Jacob

Smoothing filter is the method of choice for image preprocessing and pattern recognition. We present a new concurrent method for smoothing 2D object in binary case. Proposed method provides a parallel computation while preserving the…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-01 Ramzi Mahmoudi , Mohamed Akil

Pipeline parallelism (PP) when training neural networks enables larger models to be partitioned spatially, leading to both lower network communication and overall higher hardware utilization. Unfortunately, to preserve the statistical…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-02-11 Bowen Yang , Jian Zhang , Jonathan Li , Christopher Ré , Christopher R. Aberger , Christopher De Sa

Over the past two decades, topological data analysis has emerged as a field of applied mathematics with new applications and algorithmic developments appearing rapidly. Two fundamental computations in this field are persistent homology and…

Algebraic Topology · Mathematics 2021-03-02 Gunnar Carlsson , Anjan Dwaraknath , Bradley J. Nelson

In the last two decades, the continuous increase of computational power has produced an overwhelming flow of data which has called for a paradigm shift in the computing architecture and large scale data processing mechanisms. MapReduce is a…

Databases · Computer Science 2013-02-14 Sherif Sakr , Anna Liu , Ayman G. Fayoumi

Designing and implementing efficient, provably correct parallel machine learning (ML) algorithms is challenging. Existing high-level parallel abstractions like MapReduce are insufficiently expressive while low-level tools like MPI and…

Machine Learning · Computer Science 2010-06-28 Yucheng Low , Joseph Gonzalez , Aapo Kyrola , Danny Bickson , Carlos Guestrin , Joseph M. Hellerstein

In this paper we focus on preprocessing for persistent homology computations. We adapt some techniques which were successfully used for standard homology computations. The main idea is to reduce the complex prior to generating its boundary…

Geometric Topology · Mathematics 2013-05-01 Paweł Dłotko , Hubert Wagner

Roughgarden, Vassilvitskii, and Wang (JACM 18) recently introduced a novel framework for proving lower bounds for Massively Parallel Computation using techniques from boolean function complexity. We extend their framework in two different…

Data Structures and Algorithms · Computer Science 2020-01-07 Moses Charikar , Weiyun Ma , Li-Yang Tan

New hardware can substantially increase the speed and efficiency of deep neural network training. To guide the development of future hardware architectures, it is pertinent to explore the hardware and machine learning properties of…

Machine Learning · Computer Science 2021-04-13 Atli Kosson , Vitaliy Chiley , Abhinav Venigalla , Joel Hestness , Urs Köster

Mixed packing and covering problems are problems that can be formulated as linear programs using only non-negative coefficients. Examples include multicommodity network flow, the Held-Karp lower bound on TSP, fractional relaxations of set…

Data Structures and Algorithms · Computer Science 2016-01-19 Neal E. Young

Designing and implementing efficient, provably correct parallel machine learning (ML) algorithms is challenging. Existing high-level parallel abstractions like MapReduce are insufficiently expressive while low-level tools like MPI and…

Machine Learning · Computer Science 2014-08-12 Yucheng Low , Joseph E. Gonzalez , Aapo Kyrola , Danny Bickson , Carlos E. Guestrin , Joseph Hellerstein

A novel multi-resolution technique called border mapping multi-resolution (BMMR) is proposed for projection-based particle methods. The BMMR aims to obtain background equivalent particle distributions in the two sides of a border between…

The approximate minimum degree algorithm is widely used before numerical factorization to reduce fill-in for sparse matrices. While considerable attention has been given to the numerical factorization process, less focus has been placed on…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-26 Yen-Hsiang Chang , Aydın Buluç , James Demmel

This paper proposes a parallel numerical algorithm to simulate the flow and the transport in a discrete fracture network taking into account the mass exchanges with the surrounding matrix. The discretization of the Darcy fluxes is based on…

Numerical Analysis · Mathematics 2016-11-18 Feng Xing , Roland Masson , Simon Lopez

This study addresses the challenge of simulating realistic particle systems by proposing a novel particle decomposition scheme that improves the parallel performance of surface resolved particle simulations. Realistic particle systems often…

Fluid Dynamics · Physics 2024-03-21 J. E. Marquardt , N. Hafen , M. J. Krause

Biological and physical systems often exhibit distinct structures at different spatial/temporal scales. Persistent homology is an algebraic tool that provides a mathematical framework for analyzing the multi-scale structures frequently…

Algebraic Topology · Mathematics 2016-02-01 Jonathan Jaquette , Miroslav Kramár
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