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Networks serve as a tool used to examine the large-scale connectivity patterns in complex systems. Modelling their generative mechanism nonparametrically is often based on step-functions, such as the stochastic block models. These models…

Methodology · Statistics 2024-01-11 Arthur Verdeyme , Sofia C. Olhede

Unsupervised learning aims at the discovery of hidden structure that drives the observations in the real world. It is essential for success in modern machine learning. Latent variable models are versatile in unsupervised learning and have…

Machine Learning · Computer Science 2016-06-13 Furong Huang

Cortical sensory neurons are known to be highly variable, in the sense that responses evoked by identical stimuli often change dramatically from trial to trial. The origin of this variability is uncertain, but it is usually interpreted as…

Neurons and Cognition · Quantitative Biology 2007-05-23 Gleb Basalyga , Emilio Salinas

Probabilistic forecasting relies on past observations to provide a probability distribution for a future outcome, which is often evaluated against the realization using a scoring rule. Here, we perform probabilistic forecasting with…

Machine Learning · Statistics 2024-03-06 Lorenzo Pacchiardi , Rilwan Adewoyin , Peter Dueben , Ritabrata Dutta

The dynamics of biological systems, from proteins to cells to organisms, is complex and stochastic. To decipher their physical laws, we need to bridge between experimental observations and theoretical modeling. Thanks to progress in…

Soft Condensed Matter · Physics 2024-06-05 Pierre Ronceray

Stochasticity and limited precision of synaptic weights in neural network models are key aspects of both biological and hardware modeling of learning processes. Here we show that a neural network model with stochastic binary weights…

Disordered Systems and Neural Networks · Physics 2018-07-04 Carlo Baldassi , Federica Gerace , Hilbert J. Kappen , Carlo Lucibello , Luca Saglietti , Enzo Tartaglione , Riccardo Zecchina

After being considered as a nuisance to be filtered out, it became recently clear that biochemical noise plays a complex role, often fully functional, for a genetic network. The influence of intrinsic and extrinsic noises on genetic…

Molecular Networks · Quantitative Biology 2015-06-05 Giulio Caravagna , Giancarlo Mauri , Alberto d'Onofrio

Continual learning on edge devices poses unique challenges due to stringent resource constraints. This paper introduces a novel method that leverages stochastic competition principles to promote sparsity, significantly reducing deep network…

Machine Learning · Computer Science 2024-07-16 Theodoros Christophides , Kyriakos Tolias , Sotirios Chatzis

Humans and animals exhibit a range of interesting behaviors in dynamic environments, and it is unclear how our brains actively reformat this dense sensory information to enable these behaviors. Experimental neuroscience is undergoing a…

Neurons and Cognition · Quantitative Biology 2023-11-07 Aran Nayebi

Spiking neural networks (SNNs) employing unsupervised learning methods inspired by neural plasticity are expected to be a new framework for artificial intelligence. In this study, we investigated the effect of multiple types of neural…

Neural and Evolutionary Computing · Computer Science 2026-01-19 Shinnosuke Touda , Hirotsugu Okuno

Regulation of gene expression is the consequence of interactions between the promoter of the gene and the transcription factors (TFs). In this paper, we explore the features of a genetic network where the TFs (activators and repressors)…

Molecular Networks · Quantitative Biology 2025-06-05 Amit Kumar Das , Debabrata Biswas

Deep neural networks and brains both learn and share superficial similarities: processing nodes are likened to neurons and adjustable weights are likened to modifiable synapses. But can a unified theoretical framework be found to underlie…

Disordered Systems and Neural Networks · Physics 2025-09-29 Arsham Ghavasieh , Meritxell Vila-Minana , Akanksha Khurd , John Beggs , Gerardo Ortiz , Santo Fortunato

Heralded by the initial success in speech recognition and image classification, learning-based approaches with neural networks, commonly referred to as deep learning, have spread across various fields. A primitive form of a neural network…

Robotics · Computer Science 2024-09-02 Takuma Yoneda

We propose a general framework to extract microscopic interactions from raw configurations with deep neural networks. The approach replaces the modeling Hamiltonian by the neural networks, in which the interaction is encoded. It can be…

Computational Physics · Physics 2020-08-19 Lingxiao Wang , Yin Jiang , Kai Zhou

This paper is concerned with stochastic reaction-diffusion kinetics governed by the reaction-diffusion master equation. Specifically, the primary goal of this paper is to provide a mechanistic basis of Turing pattern formation that is…

Quantitative Methods · Quantitative Biology 2015-04-23 Yutaka Hori , Shinji Hara

There is a concerted effort to build domain-general artificial intelligence in the form of universal neural network models with sufficient computational flexibility to solve a wide variety of cognitive tasks but without requiring…

Neural and Evolutionary Computing · Computer Science 2023-03-27 Jascha Achterberg , Danyal Akarca , Moataz Assem , Moritz Heimbach , Duncan E. Astle , John Duncan

In this work, we investigate a novel training procedure to learn a generative model as the transition operator of a Markov chain, such that, when applied repeatedly on an unstructured random noise sample, it will denoise it into a sample…

Machine Learning · Statistics 2017-03-22 Florian Bordes , Sina Honari , Pascal Vincent

Mathematical models of biological neural networks are associated to a rich and complex class of stochastic processes. In this paper, we consider a simple {\em plastic} neural network whose {\em connectivity/synaptic strength} $(W(t))$…

Probability · Mathematics 2021-06-30 Philippe Robert , Gaetan Vignoud

Physics-inspired neural networks (NNs), such as Hamiltonian or Lagrangian NNs, dramatically outperform other learned dynamics models by leveraging strong inductive biases. These models, however, are challenging to apply to many real world…

Machine Learning · Computer Science 2022-02-15 Nate Gruver , Marc Finzi , Samuel Stanton , Andrew Gordon Wilson

Advancements in artificial intelligence call for a deeper understanding of the fundamental mechanisms underlying deep learning. In this work, we propose a theoretical framework to analyze learning dynamics through the lens of dynamical…

Machine Learning · Computer Science 2025-10-13 Yuchen Lin , Yong Zhang , Sihan Feng , Hong Zhao
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