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The theory of natural selection has two forms. Deductive theory describes how populations change over time. One starts with an initial population and some rules for change. From those assumptions, one calculates the future state of the…

Populations and Evolution · Quantitative Biology 2016-11-15 Steven A. Frank

The spatial structure of populations may promote the emergence and maintenance of cooperation. Cooperation in the prisoner's dilemma is favored under specific update rules in evolutionary graph theory models with one individual per node of…

Populations and Evolution · Quantitative Biology 2026-01-29 Damien Ribière , Alia Abbara , Anne-Florence Bitbol

Cooperation plays a fundamental role in societal and biological domains, and the population structure profoundly shapes the dynamics of evolution. Practically, individuals behave either altruistically or egoistically in multiple groups,…

Adaptation and Self-Organizing Systems · Physics 2024-04-05 Dini Wang , Peng Yi , Yiguang Hong , Jie Chen , Gang Yan

Species-rich communities, such as the microbiota or microbial ecosystems, provide key functions for human health and climatic resilience. Increasing effort is being dedicated to design experimental protocols for selecting community-level…

Populations and Evolution · Quantitative Biology 2023-06-22 Jules Fraboul , Giulio Biroli , Silvia De Monte

Essential to each other, growth and exploration are jointly observed in populations, be it alive such as animals and cells or inanimate such as goods and money. But their ability to move, crucial to cope with uncertainty and optimize…

Statistical Mechanics · Physics 2020-10-06 Thomas Gueudré , David Martin

Involution, a phenomenon of excessive competition with diminishing returns, has become a pressing socio-economic concern in contemporary China, prompting both academic inquiry and policy interventions. This paper proposes an evolutionary…

Physics and Society · Physics 2026-03-16 Bo Li , Qiwen Ge , Yong Shi

We consider a stochastic individual-based model for the evolution of a haploid, asexually reproducing population. The space of possible traits is given by the vertices of a (possibly directed) finite graph $G=(V,E)$. The evolution of the…

Probability · Mathematics 2020-03-10 Loren Coquille , Anna Kraut , Charline Smadi

Models of population growth and extinction are an increasingly popular subject of study. However, consequences of stochasticity and noise in shaping distributions and outcomes are not sufficiently explored. Here we consider a distributed…

Statistical Mechanics · Physics 2020-11-11 Bertrand Ottino-Löffler , Mehran Kardar

Collective movement is observed widely in nature, where individuals interact locally to produce globally ordered, coherent motion. In typical models of collective motion, each individual takes the average direction of multiple neighbors,…

Quantitative Methods · Quantitative Biology 2026-01-23 Yogesh Kumar KC , Arshed Nabeel , Srikanth Iyer , Vishwesha Guttal

We describe a continuous-time modelling framework for biological population dynamics that accounts for demographic noise. In the spirit of the methodology used by statistical physicists, transitions between the states of the system are…

Populations and Evolution · Quantitative Biology 2018-07-19 George W. A. Constable , Alan J. McKane

Molecular phenotypes are important links between genomic information and organismic functions, fitness, and evolution. Complex phenotypes, which are also called quantitative traits, often depend on multiple genomic loci. Their evolution…

Populations and Evolution · Quantitative Biology 2015-06-12 Armita Nourmohammad , Stephan Schiffels , Michael Laessig

The dynamics of populations is rich, taking into account that both, the individual's actions and the population's fitness are coupled. The way in which an individual chooses a strategy depends off course on the interaction with other…

Biological Physics · Physics 2007-07-20 Juan G. Diaz Ochoa

Collective motion - or flocking - is an emergent phenomena that underlies many biological processes of relevance, from cellular migrations to animal groups movement. In this work, we derive scaling relations for the fluctuations of the mean…

Soft Condensed Matter · Physics 2023-02-13 Martino Brambati , Giuseppe Fava , Francesco Ginelli

Whether or not cooperation is favored in evolutionary games on graphs depends on the population structure and spatial properties of the interaction network. Population structures can be expressed as configurations. Such configurations…

Populations and Evolution · Quantitative Biology 2019-03-21 Hendrik Richter

The growth of a population divided among spatial sites, with migration between the sites, is sometimes modelled by a product of random matrices, with each diagonal elements representing the growth rate in a given time period, and…

Populations and Evolution · Quantitative Biology 2018-09-12 David Steinsaltz , Shripad Tuljapurkar

We introduce a model to study the impact of catastrophes on evolutionary paths. If we do not allow catastrophes the number of changes in the maximum fitness of a population grows logarithmically with respect to time. Allowing catastrophes…

Populations and Evolution · Quantitative Biology 2021-11-16 Rinaldo B. Schinazi

We consider the evolution of large but finite populations on arbitrary fitness landscapes. We describe the evolutionary process by a Markov, Moran process. We show that to $\mathcal O(1/N)$, the time-averaged fitness is lower for the finite…

Populations and Evolution · Quantitative Biology 2015-06-04 Dirk M. Lorenz , Jeong-Man Park , Michael W. Deem

We study evolutionary game dynamics in finite populations. We analyze an evolutionary process, which we call pairwise comparison, for which we adopt the ubiquitous Fermi distribution function from statistical mechanics. The inverse…

Populations and Evolution · Quantitative Biology 2007-05-23 Arne Traulsen , Martin A. Nowak , Jorge M. Pacheco

Evolutionary branching is analysed in a stochastic, individual-based population model under mutation and selection. In such models, the common assumption is that individual reproduction and life career are characterised by values of a…

Populations and Evolution · Quantitative Biology 2025-10-01 S. Sagitov , B. Mehlig , P. Jagers , V. Vatutin

Natural rivers connect to each other to form networks. The geometric structure of a river network can significantly influence spatial dynamics of populations in the system. We consider a process-oriented model to describe population…

Analysis of PDEs · Mathematics 2019-06-26 Yu Jin , Rui Peng , Junping Shi