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The dynamics of complex systems generally include high-dimensional, non-stationary and non-linear behavior, all of which pose fundamental challenges to quantitative understanding. To address these difficulties we detail a new approach based…

Quantitative Methods · Quantitative Biology 2020-09-11 Antonio Carlos Costa , Tosif Ahamed , Greg J. Stephens

Large populations may contain numerous simultaneously segregating polymorphisms subject to natural selection. Since selection acts on individuals whose fitness depends on many loci, different loci affect each other's dynamics. This leads to…

Populations and Evolution · Quantitative Biology 2011-08-09 Richard A. Neher , Boris I. Shraiman

The establishment and spreading of biological populations depends crucially on population growth at low densities. The Allee effect is a problem in those populations where the per-capita growth rate at low densities is reduced. We examine…

Statistical Mechanics · Physics 2011-04-12 Michael T. Gastner , Beata Oborny , Alexey B. Ryabov , Bernd Blasius

We study a variant of the cyclic Lotka-Volterra model with three-agent interactions. Inspired by a multiplayer variation of the Rock-Paper-Scissors game, the model describes an ideal ecosystem in which cyclic competition among three species…

Populations and Evolution · Quantitative Biology 2020-10-09 Filippo Palombi , Stefano Ferriani , Simona Toti

We consider the local bifurcation and global dynamics of a predator-prey model with cooperative hunting and Allee effect. For the model with weak cooperation, we prove the existence of limit cycle, heteroclinic cycle at a threshold of…

Dynamical Systems · Mathematics 2020-07-28 Yanfei Du , Ben Niu , Junjie Wei

Laboratory experiments with bacterial colonies, under well-controlled conditions often lead to evolutionary diversification, where at least two ecotypes emerge from an initially monomorphic population. Empirical evidence suggests that such…

Populations and Evolution · Quantitative Biology 2024-11-06 Roberto Corral López , Samir Suweis , Sandro Azaele , Miguel A. Muñoz

Consider a genetic locus carrying a strongly beneficial allele which has recently fixed in a large population. As strongly beneficial alleles fix quickly, sequence diversity at partially linked neutral loci is reduced. This phenomenon is…

Populations and Evolution · Quantitative Biology 2007-05-23 P. Pfaffelhuber , A. Studeny

The central task in the study of self-organization is to explore the general mechanism of emergences. However, this is inhibited by the missing of a full knowledge of the microscopic dynamics of emergence. Here, in this study, the…

Soft Condensed Matter · Physics 2022-04-21 Yang Yang , Zhi Chao Zhang , Fei Qi , Tian Hui Zhang

We consider two models of one-dimensional random walks among biased i.i.d. random conductances: the first is the classical exponential tilt of the conductances, while the second comes from the effect of adding an external field to a random…

Probability · Mathematics 2017-11-15 Quentin Berger , Michele Salvi

Many populations of animals or plants, exhibit a metapopulation structure with close, spatially-separated subpopulations. The field of metapopulation theory has made significant advancements since the influential Levins model. Various…

Populations and Evolution · Quantitative Biology 2024-03-08 Marc Jorba-Cuscó , Ruth I. Oliva-Zúniga , Josep Sardanyés , Daniel Pérez-Palau

Adaptation in response to selection on polygenic phenotypes may occur via subtle allele frequencies shifts at many loci. Current population genomic techniques are not well posed to identify such signals. In the past decade, detailed…

Populations and Evolution · Quantitative Biology 2014-08-19 Jeremy J. Berg , Graham Coop

We find an advantage of recombination for a category of complex fitness landscapes. Recent studies of empirical fitness landscapes reveal complex gene interactions and multiple peaks, and recombination can be a powerful mechanism for…

Populations and Evolution · Quantitative Biology 2014-11-10 Kristina Crona

In this paper, we derive the distribution of a two-dimensional (complex) random walk in which the angle of each step is restricted to a subset of the circle. This setting appears in various domains, such as in over-the-air computation in…

Signal Processing · Electrical Eng. & Systems 2026-05-18 Karl-Ludwig Besser

Macroscopic properties of heterogeneous media are frequently modelled by regular lattice models, which are based on a relatively small basic cluster of lattice sites. Here, we extend one of such models to any cluster's size kxk. We also…

Statistical Mechanics · Physics 2015-03-24 W. Olchawa , R. Wiśniowski , D. Frączek , R. Piasecki

We propose a model of a one-dimensional random walk in dynamic random environment that interpolates between two classical settings: (I) the random environment is sampled at time zero only; (II) the random environment is resampled at every…

Probability · Mathematics 2017-08-07 L. Avena , F. den Hollander

Dynamical correlations of various local operators are studied in the spin-half two-channel Kondo (2CK) model in the presence of channel anisotropy or external magnetic field. A conformal field theory-based scaling approach is used to…

Strongly Correlated Electrons · Physics 2009-11-13 A. I. Toth , G. Zarand

Scaling laws illuminate Nature's fundamental biological principles and guide bioinspired materials and structural designs. In simple cases they are based on the fundamental principle that all laws of nature remain unchanged (i.e.,…

Biological Physics · Physics 2025-02-18 Huan Liu , Shashank Priya , Richard D. James

We study the effect of spatial structure, genetic drift, mutation, and selective pressure on the evolutionary dynamics in a simplified model of asexual organisms colonizing a new territory. Under an appropriate coarse-graining, the…

Statistical Mechanics · Physics 2013-01-15 Maxim O. Lavrentovich , Kirill S. Korolev , David R. Nelson

The spatio-temporal arrangement of interacting populations often influences the maintenance of species diversity and is a subject of intense research. Here, we study the spatio-temporal patterns arising from the cyclic competition between…

Populations and Evolution · Quantitative Biology 2014-09-10 Bartosz Szczesny , Mauro Mobilia , Alastair M. Rucklidge

The Moran model with recombination is considered, which describes the evolution of the genetic composition of a population under recombination and resampling. There are $n$ sites (or loci), a finite number of letters (or alleles) at every…

Probability · Mathematics 2018-11-01 Mareike Esser , Sebastian Probst , Ellen Baake