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We develop a landscape-flux framework to investigate observed frequency distributions of vegetation and the stability of these ecological systems under fluctuations. The frequency distributions can characterize the population-potential…

Populations and Evolution · Quantitative Biology 2022-10-12 Li Xu , Denis Patterson , Ann Carla Staver , Simon Asher Levin , Jin Wang

We study the stochastic evolution of four species in cyclic competition in a well mixed environment. In systems composed of a finite number $N$ of particles these simple interaction rules result in a rich variety of extinction scenarios,…

Statistical Mechanics · Physics 2012-07-09 C. H. Durney , S. O. Case , M. Pleimling , R. K. P. Zia

The population dynamics and stability of ecosystems of interacting species is studied from the perspective of non-equilibrium thermodynamics by assuming that species, through their biotic and abiotic interactions, are units of entropy…

Biological Physics · Physics 2007-05-23 Karo Michaelian

Cyclic (rock-paper-scissors-type) population models serve to mimic complex species interactions. Focusing on a paradigmatic three-species model with mutations in one dimension, we observe an interplay between equilibrium and non-equilibrium…

Statistical Mechanics · Physics 2010-07-07 Anton A. Winkler , Tobias Reichenbach , Erwin Frey

Spatial metapopulation models are fundamental to theoretical ecology, enabling to study how landscape structure influences global species dynamics. Traditional models, including recent generalizations, often rely on the deterministic limit…

Populations and Evolution · Quantitative Biology 2025-06-24 Alice Doimo , Giorgio Nicoletti , Davide Bernardi , Prajwal Padmanabha

We propose a new procedure to monitor and forecast the onset of transitions in high dimensional complex systems. We describe our procedure by an application to the Tangled Nature model of evolutionary ecology. The quasi-stable…

Adaptation and Self-Organizing Systems · Physics 2014-12-31 Andrea Cairoli , Duccio Piovani , Henrik Jeldtoft Jensen

Statistical physics has proven to be a very fruitful framework to describe phenomena outside the realm of traditional physics. The last years have witnessed the attempt by physicists to study collective phenomena emerging from the…

Physics and Society · Physics 2009-05-11 Claudio Castellano , Santo Fortunato , Vittorio Loreto

Ecological systems are governed by complex interactions which are mainly nonlinear. In order to capture this complexity and nonlinearity, statistical models recently gained popularity. However, although these models are commonly applied in…

Quantitative Methods · Quantitative Biology 2011-07-29 Can Ozan Tan , Uygar Ozesmi , Meryem Beklioglu , Esra Per , Bahtiyar Kurt

Evolutionary game dynamics is one of the most fruitful frameworks for studying evolution in different disciplines, from Biology to Economics. Within this context, the approach of choice for many researchers is the so-called replicator…

Populations and Evolution · Quantitative Biology 2009-11-14 Carlos P. Roca , José A. Cuesta , Angel Sánchez

A stationary spatial model is an idealization and we expect that the true dependence structures of physical phenomena are spatially varying, but how should we handle this non-stationarity in practice? We study the challenges involved in…

Methodology · Statistics 2015-09-15 Geir-Arne Fuglstad , Daniel Simpson , Finn Lindgren , Håvard Rue

Standard geostatistical models assume stationarity and rely on a variogram model to account for the spatial dependence in the observed data. In some instances, this assumption that the spatial dependence structure is constant throughout the…

Methodology · Statistics 2022-12-16 Dave Higdon , Jenise Swall , John Kern

Determining the relative importance of environmental factors, biotic interactions and stochasticity in assembling and maintaining species-rich communities remains a major challenge in ecology. In plant communities, interactions between…

Populations and Evolution · Quantitative Biology 2018-03-20 T. Rajala , S. Olhede , D. J. Murrell

Forest transitions, characterized by dynamic shifts between forest, agricultural, and abandoned lands, are complex phenomena. This study developed a stochastic differential equation model to capture the intricate dynamics of these…

Machine Learning · Statistics 2025-07-30 Satoshi Kumabe , Tianyu Song , Ton Viet Ta

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-18 Chengyi Tu , Samir Suweis , Jacopo Grillib , Marco Formentin , Amos Maritan

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-21 Chengyi Tu , Samir Suweis , Jacopo Grilli , Marco Formentin , Amos Maritan

Understanding factors that shape biodiversity and species coexistence across scales is of utmost importance in ecology, both theoretically and for conservation policies. Species-area relationships (SARs), measuring how the number of…

Populations and Evolution · Quantitative Biology 2012-06-06 Massimo Cencini , Simone Pigolotti , Miguel A. Muñoz

Spatio-temporal processes in environmental applications are often assumed to follow a Gaussian model, possibly after some transformation. However, heterogeneity in space and time might have a pattern that will not be accommodated by…

Applications · Statistics 2021-10-15 Thaís C. O. da Fonseca , Viviana G. R. Lobo , Alexandra M. Schmidt

Transformations to create more sustainable social-ecological systems are urgently needed. Structural change is a feature of transformations of social-ecological systems that is of critical importance but is little understood. Here, we…

Adaptation and Self-Organizing Systems · Physics 2017-04-21 Steven J. Lade , Örjan Bodin , Jonathan F. Donges , Elin Enfors Kautsky , Diego Galafassi , Per Olsson , Maja Schlüter

We describe a continuous-time modelling framework for biological population dynamics that accounts for demographic noise. In the spirit of the methodology used by statistical physicists, transitions between the states of the system are…

Populations and Evolution · Quantitative Biology 2018-07-19 George W. A. Constable , Alan J. McKane

The basic mechanics of evolution have been understood since Darwin. But debate continues over whether macroevolutionary phenomena are driven primary by the fitness structure of genotype space or by ecological interaction. In this paper we…

Populations and Evolution · Quantitative Biology 2012-10-22 David V. Foster , Mary M. Rorick , Tanja Gesell , Laura Feeney , Jacob G. Foster
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