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The D4M tool is used by hundreds of researchers to perform complex analytics on unstructured data. Over the past few years, the D4M toolbox has evolved to support connectivity with a variety of database engines, graph analytics in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-02-13 Lauren Milechin , Alexander Chen , Vijay Gadepally , Dylan Hutchison , Siddharth Samsi , Jeremy Kepner

Each step in the data analytics pipeline is important, including database ingest and query. The D4M-Accumulo database connector has allowed analysts to quickly and easily ingest to and query from Apache Accumulo using MATLAB(R)/GNU Octave…

Databases · Computer Science 2018-12-18 Lauren Milechin , Vijay Gadepally , Jeremy Kepner

Julia is a new language for writing data analysis programs that are easy to implement and run at high performance. Similarly, the Dynamic Distributed Dimensional Data Model (D4M) aims to clarify data analysis operations while retaining…

Mathematical Software · Computer Science 2016-12-13 Alexander Chen , Alan Edelman , Jeremy Kepner , Vijay Gadepally , Dylan Hutchison

The ability to collect and analyze large amounts of data is a growing problem within the scientific community. The growing gap between data and users calls for innovative tools that address the challenges faced by big data volume, velocity…

Python has become a standard scientific computing language with fast-growing support of machine learning and data analysis modules, as well as an increasing usage of big data. The Dynamic Distributed Dimensional Data Model (D4M) offers a…

Non-traditional, relaxed consistency, triple store databases are the backbone of many web companies (e.g., Google Big Table, Amazon Dynamo, and Facebook Cassandra). The Apache Accumulo database is a high performance open source relaxed…

The Apache Accumulo database is an open source relaxed consistency database that is widely used for government applications. Accumulo is designed to deliver high performance on unstructured data such as graphs of network data. This paper…

Analyzing large scale networks requires high performance streaming updates of graph representations of these data. Associative arrays are mathematical objects combining properties of spreadsheets, databases, matrices, and graphs, and are…

The Dynamic Distributed Dimensional Data Model (D4M) library implements associative arrays in a variety of languages (Python, Julia, and Matlab/Octave) and provides a lightweight in-memory database implementation of hypersparse arrays that…

Detecting anomalous behavior in network traffic is a major challenge due to the volume and velocity of network traffic. For example, a 10 Gigabit Ethernet connection can generate over 50 MB/s of packet headers. For global network providers,…

Recent technological advances in Next Generation Sequencing tools have led to increasing speeds of DNA sample collection, preparation, and sequencing. One instrument can produce over 600 Gb of genetic sequence data in a single run. This…

Quantitative Methods · Quantitative Biology 2016-11-18 Stephanie Dodson , Darrell O. Ricke , Jeremy Kepner

SciDB is a scalable, computational database management system that uses an array model for data storage. The array data model of SciDB makes it ideally suited for storing and managing large amounts of imaging data. SciDB is designed to…

D4R is a digital platform designed to assist non-technical users, particularly historians, in exploring textual documents through advanced graphical tools for text analysis and knowledge extraction. By leveraging a large language model, D4R…

Information Retrieval · Computer Science 2025-03-28 Michel Boeglin , David Kahn , Josiane Mothe , Diego Ortiz , David Panzoli

Graph database engines play a pivotal role in efficiently storing and managing graph data across various domains, including bioinformatics, knowledge graphs, and recommender systems. Ensuring data accuracy within graph database engines is…

Databases · Computer Science 2024-02-02 Jiayi Wu , Zhengyu Wu , Ronghua Li , Hongchao Qin , Guoren Wang

Graph algorithms have wide applicablity to a variety of domains and are often used on massive datasets. Recent standardization efforts such as the GraphBLAS specify a set of key computational kernels that hardware and software developers…

Databases · Computer Science 2016-12-13 Timothy Weale , Vijay Gadepally , Dylan Hutchison , Jeremy Kepner

Analyzing the increasingly large volumes of data that are available today, possibly including the application of custom machine learning models, requires the utilization of distributed frameworks. This can result in serious productivity…

Databases · Computer Science 2019-08-20 Phanwadee Sinthong , Michael J. Carey

Graph algorithms play an important role in many computer science areas. In order to solve problems that can be modeled using graphs, it is necessary to use a data structure that can represent those graphs in an efficient manner. On top of…

Mathematical Software · Computer Science 2023-08-22 Cristian Frăsinaru , Emanuel Florentin Olariu

GPUs and other accelerators are popular devices for accelerating compute-intensive, parallelizable applications. However, programming these devices is a difficult task. Writing efficient device code is challenging, and is typically done in…

Programming Languages · Computer Science 2018-10-23 Tim Besard , Christophe Foket , Bjorn De Sutter

Big data and the Internet of Things era continue to challenge computational systems. Several technology solutions such as NoSQL databases have been developed to deal with this challenge. In order to generate meaningful results from large…

Data Structures and Algorithms · Computer Science 2016-11-11 Vijay Gadepally , Jake Bolewski , Dan Hook , Dylan Hutchison , Ben Miller , Jeremy Kepner

Table reasoning tasks have shown remarkable progress with the development of large language models (LLMs), which involve interpreting and drawing conclusions from tabular data based on natural language (NL) questions. Existing solutions…

Computation and Language · Computer Science 2024-10-11 Yuan Sui , Jiaru Zou , Mengyu Zhou , Xinyi He , Lun Du , Shi Han , Dongmei Zhang
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