Related papers: Sufficient condition for root reconstruction by pa…
We present a detailed analysis of the class of regression decision tree algorithms which employ a regulized piecewise-linear node-splitting criterion and have regularized linear models at the leaves. From a theoretic standpoint, based on…
One approach to estimating a species tree from a collection of gene trees is to first estimate probabilities of clades from the gene trees, and then to construct the species tree from the estimated clade probabilities. While a greedy…
We consider the Ising model on a supercritical Galton-Watson tree $\mathbf{T}_n$ of depth $n$ with a sparse random external field, given by a collection of i.i.d. Bernouilli random variables with vanishing parameter $p_n$. This may me…
Self-similar Markov trees constitute a remarkable family of random compact real trees carrying a decoration function that is positive on the skeleton. As the terminology suggests, they are self-similar objects that further satisfy a Markov…
We consider a class of branching processes called Markovian binary trees, in which the individuals lifetime and reproduction epochs are modeled using a transient Markovian arrival process (TMAP). We estimate the parameters of the TMAP based…
We analyse the statistical properties of genealogical trees in a neutral model of a closed population with sexual reproduction and non-overlapping generations. By reconstructing the genealogy of an individual from the population evolution,…
The purpose of this paper is to analyze certain statistics of a recently introduced non-uniform random tree model, biased recursive trees. This model is based on constructing a random tree by establishing a correspondence with non-uniform…
Rooted, weighted continuum random trees are used to describe limits of sequences of random discrete trees. Formally, they are random quadruples $(\mathcal{T},d,r,p)$, where $(\mathcal{T},d)$ is a tree-like metric space, $r\in\mathcal{T}$ is…
Consider $k$-colorings of the complete tree of depth $\ell$ and branching factor $\Delta$. If we fix the coloring of the leaves, as $\ell$ tends to $\infty$, for what range of $k$ is the root uniformly distributed over all $k$ colors? This…
Net-trees are a general purpose data structure for metric data that have been used to solve a wide range of algorithmic problems. We give a simple randomized algorithm to construct net-trees on doubling metrics using $O(n\log n)$ time in…
We are interested in the local limits of families of random trees that satisfy the Markov branching property, which is fulfilled by a wide range of models. Loosely, this property entails that given the sizes of the sub-trees above the root,…
Tree trace reconstruction aims to learn the binary node labels of a tree, given independent samples of the tree passed through an appropriately defined deletion channel. In recent work, Davies, R\'acz, and Rashtchian used combinatorial…
We show that given a log-concave offspring distribution, the corresponding sequence of Bienaym\'e-Galton-Watson trees conditioned to have $n\geq 1$ vertices admits a realization as a Markov process $(T_n)_{n\geq1}$ which adds a new…
We address unsupervised discontinuous constituency parsing, where we observe a high variance in the performance of the only previous model in the literature. We propose to build an ensemble of different runs of the existing discontinuous…
We consider the problem of estimating the parameters in a pairwise graphical model in which the distribution of each node, conditioned on the others, may have a different parametric form. In particular, we assume that each node's…
The spanning tree heuristic is a commonly adopted procedure in network inference and estimation. It allows one to generalize an inference method developed for trees, which is usually based on a statistically rigorous approach, to a…
The paper studies a class of variational problems, modeling optimal shapes for tree roots. Given a measure $\mu$ describing the distribution of root hair cells, we seek to maximize a harvest functional $\mathcal{H}$, computing the total…
We construct random locally compact real trees called Levy trees that are the genealogical trees associated with continuous-state branching processes. More precisely, we define a growing family of discrete Galton-Watson trees with i.i.d.…
We survey results on the description of stochastically evolving genealogies of populations and marked genealogies of multitype populations or spatial populations via tree-valued Markov processes on (marked) ultrametric measure spaces. In…
We consider a family of random trees satisfying a Markov branching property. Roughly, this property says that the subtrees above some given height are independent with a law that depends only on their total size, the latter being either the…