English
Related papers

Related papers: The All-Paths and Cycles Graph Kernel

200 papers

Graph learning is currently dominated by graph kernels, which, while powerful, suffer some significant limitations. Convolutional Neural Networks (CNNs) offer a very appealing alternative, but processing graphs with CNNs is not trivial. To…

Computer Vision and Pattern Recognition · Computer Science 2019-09-04 Antoine Jean-Pierre Tixier , Giannis Nikolentzos , Polykarpos Meladianos , Michalis Vazirgiannis

Given an undirected graph $G$ and a multiset of $k$ terminal pairs $\mathcal{X}$, the Vertex-Disjoint Paths (\VDP) and Edge-Disjoint Paths (\EDP) problems ask whether $G$ has $k$ pairwise internally vertex-disjoint paths and $k$ pairwise…

Data Structures and Algorithms · Computer Science 2023-10-02 Juhi Chaudhary , Harmender Gahlawat , Michal Włodarczyk , Meirav Zehavi

Graph neural networks (GNNs) have achieved tremendous success in graph mining. However, the inability of GNNs to model substructures in graphs remains a significant drawback. Specifically, message-passing GNNs (MPGNNs), as the prevailing…

Machine Learning · Computer Science 2021-04-08 Qingqing Long , Yilun Jin , Yi Wu , Guojie Song

In several important routing contexts it is required to identify a set of routes, each of which optimizes a different criterion. For instance, in the context of vehicle routing, one route would minimize the total distance traveled, while…

Networking and Internet Architecture · Computer Science 2020-08-25 Ido Zoref , Ariel Orda

The on-line shortest path problem is considered under various models of partial monitoring. Given a weighted directed acyclic graph whose edge weights can change in an arbitrary (adversarial) way, a decision maker has to choose in each…

Machine Learning · Computer Science 2007-05-23 Andras Gyorgy , Tamas Linder , Gabor Lugosi , Gyorgy Ottucsak

We propose Slim Graph: the first programming model and framework for practical lossy graph compression that facilitates high-performance approximate graph processing, storage, and analytics. Slim Graph enables the developer to express…

Data Structures and Algorithms · Computer Science 2021-08-04 Maciej Besta , Simon Weber , Lukas Gianinazzi , Robert Gerstenberger , Andrey Ivanov , Yishai Oltchik , Torsten Hoefler

Searching for a path between two nodes in a graph is one of the most well-studied and fundamental problems in computer science. In numerous domains such as robotics, AI, or biology, practitioners develop search heuristics to accelerate…

Machine Learning · Computer Science 2023-01-12 Michal Pándy , Weikang Qiu , Gabriele Corso , Petar Veličković , Rex Ying , Jure Leskovec , Pietro Liò

A {\em kernel by properly colored paths} of an arc-colored digraph $D$ is a set $S$ of vertices of $D$ such that (i) no two vertices of $S$ are connected by a properly colored directed path in $D$, and (ii) every vertex outside $S$ can…

Combinatorics · Mathematics 2017-04-28 Yandong Bai , Shinya Fujita , Shenggui Zhang

Biological and cellular systems are often modeled as graphs in which vertices represent objects of interest (genes, proteins, drugs) and edges represent relational ties among these objects (binds-to, interacts-with, regulates). This…

Machine Learning · Statistics 2017-03-16 Jose Lugo-Martinez , Predrag Radivojac

Getting a labeling of vertices close to the structure of the graph has been proved to be of interest in many applications e.g., to follow smooth signals indexed by the vertices of the network. This question can be related to a graph…

Discrete Mathematics · Computer Science 2015-02-17 Ronan Hamon , Pierre Borgnat , Patrick Flandrin , Céline Robardet

We introduce stronger notions for approximate single-source shortest-path distances, show how to efficiently compute them from weaker standard notions, and demonstrate the algorithmic power of these new notions and transformations. One…

Data Structures and Algorithms · Computer Science 2022-11-01 Václav Rozhoň , Bernhard Haeupler , Anders Martinsson , Christoph Grunau , Goran Zuzic

Graphlet analysis is an approach to network analysis that is particularly popular in bioinformatics. We show how to set up a system of linear equations that relate the orbit counts and can be used in an algorithm that is significantly…

Data Structures and Algorithms · Computer Science 2017-04-12 Tomaž Hočevar , Janez Demšar

In the first part of this paper, we survey results that are associated with three types of Laplacian matrices:difference, normalized, and signless. We derive eigenvalue and eigenvector formulaes for paths and cycles using circulant matrices…

Combinatorics · Mathematics 2012-11-06 K. K. K. R. Perera , Yoshihiro Mizoguchi

Provenance is a record that describes how entities, activities, and agents have influenced a piece of data; it is commonly represented as graphs with relevant labels on both their nodes and edges. With the growing adoption of provenance in…

Machine Learning · Computer Science 2021-09-16 David Kohan Marzagão , Trung Dong Huynh , Ayah Helal , Sean Baccas , Luc Moreau

We study the computational complexity of routing multiple objects through a network in such a way that only few collisions occur: Given a graph $G$ with two distinct terminal vertices and two positive integers $p$ and $k$, the question is…

Computational Complexity · Computer Science 2017-05-11 Till Fluschnik , Marco Morik , Manuel Sorge

From social science to biology, numerous applications often rely on graphlets for intuitive and meaningful characterization of networks at both the global macro-level as well as the local micro-level. While graphlets have witnessed a…

Social and Information Networks · Computer Science 2016-02-17 Nesreen K. Ahmed , Jennifer Neville , Ryan A. Rossi , Nick Duffield , Theodore L. Willke

This paper studies semi-supervised graph classification, which is an important problem with various applications in social network analysis and bioinformatics. This problem is typically solved by using graph neural networks (GNNs), which…

Machine Learning · Computer Science 2022-05-24 Wei Ju , Junwei Yang , Meng Qu , Weiping Song , Jianhao Shen , Ming Zhang

Recent works on representation learning for graph structured data predominantly focus on learning distributed representations of graph substructures such as nodes and subgraphs. However, many graph analytics tasks such as graph…

Artificial Intelligence · Computer Science 2017-07-18 Annamalai Narayanan , Mahinthan Chandramohan , Rajasekar Venkatesan , Lihui Chen , Yang Liu , Shantanu Jaiswal

We perform a massive evaluation of neural networks with architectures corresponding to random graphs of various types. We investigate various structural and numerical properties of the graphs in relation to neural network test accuracy. We…

Machine Learning · Computer Science 2020-12-03 Romuald A. Janik , Aleksandra Nowak

We discuss a new algorithmic type of problem in random graphs studying the minimum number of queries one has to ask about adjacency between pairs of vertices of a random graph $G\sim {\mathcal G}(n,p)$ in order to find a subgraph which…

Combinatorics · Mathematics 2016-08-05 Asaf Ferber , Michael Krivelevich , Benny Sudakov , Pedro Vieira