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In cystic fibrosis (CF), impaired mucociliary clearance leads to chronic infection and inflammation. However, cilia beating features in a CF altered environment, consisting of dehydrated airway surface liquid layer and abnormal mucus, has…

The biofilms response on active attachment surfaces (submerged plant leaves) and inert attachment surfaces (biomimetic plant glass attachment surfaces) and their effects on PAHs and nitrogen transformation under the application conditions…

Cell Behavior · Quantitative Biology 2025-10-07 Xiabinchen Zhao , Liling Xia , Zhenhua Zhao

Gliding is a means of locomotion on rigid substrates utilized by a number of bacteria includingmyxobacteria and cyanobacteria. One of the hypotheses advanced to explain this motility mechanism hinges on the role played by the slime…

Biological Physics · Physics 2015-03-02 Epifanio G. Virga

Bacteria populate the colon where they replicate and migrate in response to nutrient availability. Here I model the colon bacterial population as a sandpile model, the colon-pile. Sand addition mimics bacterial replication and grains…

Populations and Evolution · Quantitative Biology 2020-03-09 Alexei Vazquez

Corrosion in concrete prevents in-situ observation, necessitating models to provide insight into the local reaction currents. We present a computational method for predicting corrosion rates of reinforcements within concrete under natural…

Chemical Physics · Physics 2025-04-15 T. Hageman , C. Andrade , E. Martínez-Pañeda

Reducing antibiotic usage in livestock animals has become an urgent issue worldwide to prevent antimicrobial resistance. Here, abuse of chlortetracycline (CTC), a versatile antibacterial agent, on the performance, blood components, fecal…

Interactions between swimming cells and surfaces are essential to many microbiological processes, from bacterial biofilm formation to human fertilization. However, in spite of their fundamental importance, relatively little is known about…

Biological Physics · Physics 2013-02-04 Vasily Kantsler , Jörn Dunkel , Marco Polin , Raymond E. Goldstein

Bioconvection, a phenomenon arising from the collective motion of motile microorganisms, plays a crucial role in shaping microbial distributions, fluid dynamics, and bloom formation in aquatic environments. While extensive research has…

Biological Physics · Physics 2025-04-15 Samarendu Biswas , Sachidananda Mahato , Jayabrata Dhar

Iron is an essential trace-element for most organisms. However, because high concentration of free intracellular iron is cytotoxic, cells have developed complex regulatory networks that keep free intracellular iron concentration at optimal…

Molecular Networks · Quantitative Biology 2007-05-23 Szabolcs Semsey , Anna M. C. Andersson , Sandeep Krishna , Mogens H Jensen , Eric Massé , Kim Sneppen

A large component of the building material concrete consists of aggregate with varying particle sizes between 0.125 and 32 mm. Its actual size distribution significantly affects the quality characteristics of the final concrete in both, the…

Computer Vision and Pattern Recognition · Computer Science 2022-05-31 Max Coenen , Dries Beyer , Christian Heipke , Michael Haist

Many stiff biological materials exhibiting outstanding compressive strength/weight ratio are characterized by high porosity, spanning different size-scales, typical examples being bone and wood. A successful bio-mimicking of these materials…

Materials Science · Physics 2023-05-29 Riccardo Cavuoto , Pietro Lenarda , Anna Tampieri , Davide Bigoni , Marco Paggi

The self-amplifying creeping of salts can produce striking macroscopic structures, such as desert roses in arid regions and salt pillars near saline lakes. While these formations are visually remarkable, salt crystallization, often seen as…

Soft Condensed Matter · Physics 2025-08-27 R. J. Wijnhorst , M. Prat , N. Shahidzadeh

Solution self-assembly of amphiphilic block copolymers (BCs) is typically performed by a solvent-to-water exchange. However, BC assemblies are often trapped in metastable states depending on the mixing conditions such as the magnitude and…

Bacterial colonies are a well-known example of living active matter, exhibiting collective behaviors such as nematic alignment and collective motion that play an important role in the spread of microbial infections. While the underlying…

Salt precipitation during CO2 injection into saline aquifers obstructs flow-controlling pore throats and reduces permeability, yet reactive transport models assume salt forms dispersed, non-porous crystals with minimal flow impact. We…

Bacteria can adjust the structure of colonies and biofilms to enhance their survival rate under external stress. Here, we explore the link between bacterial interaction forces and colony structure. We show that the activity of extracellular…

Drying induced cracking of concrete surfaces and repair layers is a common problem. A principal cause for this type of cracking is the moisture and resulting contraction gradient that develops in the cement paste matrix upon drying. This…

Materials Science · Physics 2015-09-17 Jan Bisschop , Falk K. Wittel

Bio-chemical reactions enable the production of biomimetic materials such as sandstones. In the present study, microbiologically-induced calcium carbonate precipitation (MICP) is used to manufacture laboratory-scale specimens for fracture…

Materials Science · Physics 2023-11-15 C. Konstantinou , E. Martínez-Pañeda , G. Biscontin , N. A. Fleck

Understanding the out-of equilibrium behaviour of point defects in crystals, yields insights into the nature and fragility of the ordered state, as well as being of great practical importance. In some rare cases defects are spontaneously…

Soft Condensed Matter · Physics 2013-10-14 William T. M. Irvine , Mark J. Bowick , Paul M. Chaikin

Coarsening, the process where larger structures grow at the expense of smaller ones, is a fundamental aspect of multiphase systems. The cell cytoplasm exemplifies an out-of-equilibrium multiphase system, where phase-separated condensates…

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