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Proteins are an important class of biomolecules that serve as essential building blocks of the cells. Their three-dimensional structures are responsible for their functions. In this thesis we have investigated the protein structures using a…

Molecular Networks · Quantitative Biology 2007-11-19 Ganesh Bagler

Meso-scale structures in signed networks have been studied under the limiting assumption of the validity of social balance theory, which predicts positive connections within groups and negative connections between groups. Here, we propose…

Social and Information Networks · Computer Science 2025-12-15 Wei Zhang , Olga Boichak , Tristram J. Alexander , Tiago P. Peixoto , Eduardo G. Altmann

The stochastic block model is able to generate different network partitions, ranging from traditional assortative communities to disassortative structures. Since the degree-corrected stochastic block model does not specify which mixing…

Social and Information Networks · Computer Science 2019-09-16 Xiaoyan Lu , Boleslaw K. Szymanski

Modularity is a key organizing principle in real-world large-scale complex networks. Many real-world networks exhibit modular structures such as transportation infrastructures, communication networks and social media. Having the knowledge…

Physics and Society · Physics 2020-02-26 Eitan Asher , Hillel Sanhedrai , Nagendra K. Panduranga , Reuven Cohen , Shlomo Havlin

We propose a generalization of the concept of assortativity based on the tensorial representation of multilayer networks, covering the definitions given in terms of Pearson and Spearman coefficients. Our approach can also be applied to…

Physics and Society · Physics 2015-07-17 Guilherme Ferraz de Arruda , Emanuele Cozzo , Yamir Moreno , Francisco A. Rodrigues

Degree distribution of nodes, especially a power law degree distribution, has been regarded as one of the most significant structural characteristics of social and information networks. Node degree, however, only discloses the first-order…

Social and Information Networks · Computer Science 2010-09-23 Ajay Sridharan , Yong Gao , Kui Wu , James Nastos

Many complex systems can be described as multiplex networks in which the same nodes can interact with one another in different layers, thus forming a set of interacting and co-evolving networks. Examples of such multiplex systems are social…

Physics and Society · Physics 2013-11-12 Arda Halu , Raul J. Mondragon , Pietro Panzarasa , Ginestra Bianconi

The structure of personal networks reflects how we organise and maintain social relationships. The distribution of tie strengths in personal networks is heterogeneous, with a few close, emotionally intense relationships and a larger number…

Physics and Society · Physics 2024-03-29 Sara Heydari , Gerardo Iñiguez , János Kertész , Jari Saramäki

We derive a composite centrality measure for general weighted and directed complex networks, based on measure standardisation and invariant statistical inheritance schemes. Different schemes generate different intermediate abstract measures…

Methodology · Statistics 2014-01-21 Andreas Joseph , Guanrong Chen

Networks are a fundamental model of complex systems throughout the sciences, and network datasets are typically analyzed through lower-order connectivity patterns described at the level of individual nodes and edges. However, higher-order…

Social and Information Networks · Computer Science 2018-02-21 Austin R. Benson

It has been shown that many complex networks shared distinctive features, which differ in many ways from the random and the regular networks. Although these features capture important characteristics of complex networks, their applicability…

Physics and Society · Physics 2009-11-11 Chang-Yong Lee , Sunghwan Jung

Complex contagion models have been developed to understand a wide range of social phenomena such as adoption of cultural fads, the diffusion of belief, norms, and innovations in social networks, and the rise of collective action to join a…

Physics and Society · Physics 2018-07-04 Yong Zhuang , Osman Yağan

One of the main characteristics of real-world networks is their large clustering. Clustering is one aspect of a more general but much less studied structural organization of networks, i.e. edge multiplicity, defined as the number of…

Physics and Society · Physics 2012-01-31 Vinko Zlatic , Diego Garlaschelli , Guido Caldarelli

In this paper we examine the percolation properties of higher-order networks that have non-trivial clustering and subgraph-based assortative mixing (the tendency of vertices to connect to other vertices based on subgraph joint degree). Our…

Physics and Society · Physics 2022-10-07 Peter Mann , Lei Fang , Simon Dobson

Relationship between agents can be conveniently represented by graphs. When these relationships have different modalities, they are better modelled by multilayer graphs where each layer is associated with one modality. Such graphs arise…

Machine Learning · Statistics 2021-03-05 Guillaume Braun , Hemant Tyagi , Christophe Biernacki

Reciprocity, or the tendency of individuals to mirror behavior, is a key measure that describes information exchange in a social network. Users in social networks tend to engage in different levels of reciprocal behavior. Differences in…

Machine Learning · Statistics 2023-08-22 Daniel Cirkovic , Tiandong Wang

We introduce a growing network evolution model with nodal attributes. The model describes the interactions between potentially violent V and non-violent N agents who have different affinities in establishing connections within their own…

Physics and Society · Physics 2012-01-12 Kristinka Ivanova , Ivan Iordanov

Large-scale human social network structure is typically inferred from digital trace samples of online social media platforms or mobile communication data. Instead, here we investigate the social network structure of a complete population,…

Physics and Society · Physics 2022-11-29 Eszter Bokányi , Eelke M. Heemskerk , Frank W. Takes

Lately, network sampling proved as a promising tool for simplifying large real-world networks and thus providing for their faster and more efficient analysis. Still, understanding the changes of network structure and properties under…

Social and Information Networks · Computer Science 2014-05-14 Neli Blagus , Gregor Weiss , Lovro Šubelj

The friendship paradox is the phenomenon that in social networks, people on average have fewer friends than their friends do. The generalized friendship paradox is an extension to attributes other than the number of friends. The friendship…

Social and Information Networks · Computer Science 2016-02-12 Naghmeh Momeni , Michael Rabbat