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We study a class of Stochastic Differential Equations (SDEs) with jumps modeling multistage Michaelis--Menten enzyme kinetics, in which a substrate is sequentially transformed into a product via a cascade of intermediate complexes. These…

Probability · Mathematics 2026-04-14 Arnab Ganguly , Wasiur R. KhudaBukhsh

Sparse auto-encoders (SAEs) have re-emerged as a prominent method for mechanistic interpretability, yet they face two significant challenges: the non-smoothness of the $L_1$ penalty, which hinders reconstruction and scalability, and a lack…

Artificial Intelligence · Computer Science 2026-05-19 Ouns El Harzli , Hugo Wallner , Yoonsoo Nam , Haixuan Xavier Tao

Is there really much more to say about sparse autoencoders (SAEs)? Autoencoders in general, and SAEs in particular, represent deep architectures that are capable of modeling low-dimensional latent structure in data. Such structure could…

Machine Learning · Computer Science 2025-06-09 Yin Lu , Xuening Zhu , Tong He , David Wipf

The aim of this work is to efficiently and robustly solve the statistical inverse problem related to the identification of the elastic properties at both macroscopic and mesoscopic scales of heterogeneous anisotropic materials with a…

Classical Physics · Physics 2020-06-29 Tianyu Zhang , Florent Pled , Christophe Desceliers

A simulated annealing algorithm is employed to generate a stochastic model for a Berea and a Fontainebleau sandstone with prescribed two-point probability function, lineal path function, and ``pore size'' distribution function,…

Materials Science · Physics 2009-10-31 C. Manwart , S. Torquato , R. Hilfer

This paper addresses the deconvolution problem of estimating a square-integrable probability density from observations contaminated with additive measurement errors having a known density. The estimator begins with a density estimate of the…

Statistics Theory · Mathematics 2023-04-12 David Kent , David Ruppert

Detecting multiple structural breaks in high-dimensional data remains a challenge, particularly when changes occur in higher-order moments or within complex manifold structures. In this paper, we propose REAMP (Resonance-Enhanced Analysis…

Methodology · Statistics 2026-01-14 Xiaoping Shi , Baisuo Jin , Xianhui Liu , Qiong Li

In the tasks of image aesthetic quality evaluation, it is difficult to reach both the high score area and low score area due to the normal distribution of aesthetic datasets. To reduce the error in labeling and solve the problem of normal…

Computer Vision and Pattern Recognition · Computer Science 2022-01-11 Xin Jin , Hao Lou , Huang Heng , Xiaodong Li , Shuai Cui , Xiaokun Zhang , Xiqiao Li

We investigate how fully-passive electromagnetic skins (EMSs) can be engineered to enhance channel charting (CC) in dense urban environments. We employ two complementary state-of-the-art CC techniques, semi-supervised t-distributed…

Signal Processing · Electrical Eng. & Systems 2025-11-04 Mahdi Maleki , Reza Agahzadeh Ayoubi , Marouan Mizmizi , Umberto Spagnolini

This work proposes convolutional-sparse-coded dynamic mode decomposition (CSC-DMD) by unifying extended dynamic mode decomposition (EDMD) and convolutional sparse coding. EDMD is a data driven analysis method for describing a nonlinear…

Signal Processing · Electrical Eng. & Systems 2019-02-21 Yuhei Kaneko , Shogo Muramatsu , Hiroyasu Yasuda , Kiyoshi Hayasaka , Yu Otake , Shunsuke Ono , Masahiro Yukawa

Fabrication process variations are a major source of yield degradation in the nano-scale design of integrated circuits (IC), microelectromechanical systems (MEMS) and photonic circuits. Stochastic spectral methods are a promising technique…

Computational Engineering, Finance, and Science · Computer Science 2016-11-08 Zheng Zhang , Tsui-Wei Weng , Luca Daniel

We develop a mathematical and numerical framework to solve state estimation problems for applications that present variations in the shape of the spatial domain. This situation arises typically in a biomedical context where inverse problems…

Numerical Analysis · Mathematics 2023-03-14 Felipe Galarce , Damiano Lombardi , Olga Mula

Four-dimensional Scanning Transmission Electron Microscopy (4D STEM) with data acquired using a defocused electron probe is a promising tool for characterising complex biological specimens and materials through a phase retrieval process…

Signal Processing · Electrical Eng. & Systems 2025-05-15 Amirafshar Moshtaghpour , Angus I. Kirkland

In this paper, we consider numerical approximation to periodic measure of a time periodic stochastic differential equations (SDEs) under weakly dissipative condition. For this we first study the existence of the periodic measure $\rho_t$…

Probability · Mathematics 2021-07-08 Chunrong Feng , Yu Liu , Huaizhong Zhao

We introduce the subdimensional entanglement entropy (SEE), defined on subdimensional entanglement subsystems (SESs) embedded in the bulk, as an entanglement-based probe of how geometry and topology jointly shape universal properties of…

Strongly Correlated Electrons · Physics 2026-04-16 Meng-Yuan Li , Peng Ye

Complex networks hosting binary-state dynamics arise in a variety of contexts. In spite of previous works, to fully reconstruct the network structure from observed binary data remains to be challenging. We articulate a statistical inference…

Physics and Society · Physics 2018-03-14 Chuang Ma , Han-Shuang Chen , Ying-Cheng Lai , Hai-Feng Zhang

We develop a new, efficient, and accurate method to simulate frequency-domain borehole electromagnetic (EM) measurements acquired in the presence of three-dimensional (3D) variations of the anisotropic subsurface conductivity. The method is…

The electroencephalography (EEG) signal is a non-stationary, stochastic, and highly non-linear bioelectric signal for which achieving high classification accuracy is challenging, especially when the number of subjects is limited. As…

Signal Processing · Electrical Eng. & Systems 2021-08-03 Xiangyun Li , Peng Chen , Zhanpeng Bao

Due to their text-to-image synthesis feature, diffusion models have recently seen a rise in visual perception tasks, such as depth estimation. The lack of good-quality datasets makes the extraction of a fine-grain semantic context…

Computer Vision and Pattern Recognition · Computer Science 2024-10-04 Nischal Khanal , Shivanand Venkanna Sheshappanavar

The theoretical analysis of many problems in physics, astronomy and applied mathematics requires an efficient numerical exploration of multimodal parameter spaces that exhibit broken ergodicity. Monte Carlo methods are widely used to deal…

Statistical Mechanics · Physics 2014-09-02 Stefano Martiniani , Jacob D. Stevenson , David J. Wales , Daan Frenkel
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