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One of the vital functions of naturally occurring cilia is fluid transport. Biological cilia use spatially asymmetric strokes to generate a net fluid flow that can be utilized for feeding, swimming, and other functions. Biomimetic synthetic…

Fluid Dynamics · Physics 2018-07-19 Srinivas Hanasoge , Peter J. Hesketh , Alexander Alexeev

Tidal interactions between disc galaxies depend on galaxy structure, but the details of this relationship are incompletely understood. I have constructed a three-parameter grid of bulge/disc/halo models broadly consistent with $\Lambda$CDM,…

Astrophysics of Galaxies · Physics 2015-10-14 Joshua E. Barnes

Properties of the geometric phase for a nonstatic coherent light-wave arisen in a static environment are analyzed from various angles. The geometric phase varies in a regular nonlinear way, where the center of its variation increases…

Quantum Physics · Physics 2024-03-19 Jeong Ryeol Choi

The unicellular green algae Chlamydomonas swims with two flagella, which can synchronize their beat. Synchronized beating is required to swim both fast and straight. A long-standing hypothesis proposes that synchronization of flagella…

Cell Behavior · Quantitative Biology 2013-11-26 Veikko Geyer , Frank Jülicher , Jonathon Howard , Benjamin M Friedrich

A heterodimensional cycle consists of a pair of heteroclinic connections between two saddle periodic orbits with unstable manifolds of different dimensions. Recent theoretical work on chaotic dynamics beyond the uniformly hyperbolic setting…

Dynamical Systems · Mathematics 2019-06-28 Andy Hammerlindl , Bernd Krauskopf , Gemma Mason , Hinke M. Osinga

Left-right symmetry breaking is critical to vertebrate embryonic development; in many species this process begins with cilia-driven flow in a structure termed the `node'. Primary `whirling' cilia, tilted towards the posterior, transport…

Fluid Dynamics · Physics 2010-07-13 David J. Smith , Andrew A. Smith , John R. Blake

Hydrodynamic forces may significantly affect the motion of polymers. In sheet-like cavities, such as the cell's cytoplasm and microfluidic channels, the hydrodynamic forces are long-range. It is therefore expected that that hydrodynamic…

Soft Condensed Matter · Physics 2010-08-04 Tsvi Tlusty

The conformations and dynamics of semiflexible filaments subject to a homogeneous external (gravitational) field, e.g., in a centrifuge, are studied numerically and analytically. The competition between hydrodynamic drag and bending…

Biological Physics · Physics 2016-08-23 G. Saggiorato , J. Elgeti , R. G. Winkler , G. Gompper

Nanoparticles with different surface morphologies that straddle the interface between two immiscible liquids are studied via molecular dynamics simulations. The methodology employed allows us to compute the interfacial free energy at…

Soft Condensed Matter · Physics 2016-04-27 Sepideh Razavi , Ilona Kretzschmar , Joel Koplik , Carlos E. Colosqui

The functions of many networked systems in physics, biology or engineering rely on a coordinated or synchronized dynamics of its constituents. In power grids for example, all generators must synchronize and run at the same frequency and…

Adaptation and Self-Organizing Systems · Physics 2017-09-13 Debsankha Manik , Marc Timme , Dirk Witthaut

We initiate a holographic study of coupling-dependent heavy ion collisions by analysing for the first time the effects of leading-order, inverse coupling constant corrections. In the dual description, this amounts to colliding gravitational…

High Energy Physics - Theory · Physics 2017-07-20 Sašo Grozdanov , Wilke van der Schee

Many systems of physical and biological interest are characterized by assemblies of phase oscillators whose interaction is mediated by a diffusing chemical. The coupling effect results from the fact that the local concentration of the…

Adaptation and Self-Organizing Systems · Physics 2023-06-21 Pedro Haerter , Ricardo L. Viana

Cilia and flagella are actively bending slender organelles, performing functions such as motility, feeding and embryonic symmetry breaking. We review the mechanics of viscous-dominated microscale flow, including time-reversal symmetry, drag…

Quantitative Methods · Quantitative Biology 2013-09-06 Thomas D. Montenegro-Johnson , Andrew A. Smith , David J. Smith , Daniel Loghin , John R. Blake

The paper presents a two-phase hydrodynamic model for the numerical simulation of collective motion in a thin layer of active colloids containing spherical microswimmers. The model accounts for three fundamental mechanisms governing the…

Soft Condensed Matter · Physics 2025-12-10 A. Kiverin , S. Luguev , I. Yakovenko

Empirical observations in marine ecosystems have suggested a balance of biological and advection time scales as a possible explanation of species coexistence. To characterise this scenario, we measure the time to fixation in neutrally…

Populations and Evolution · Quantitative Biology 2018-04-09 Tobias Galla , Vicente Pérez-Muñuzuri

When swimming animals form cohesive groups, they can reap several benefits. Our understanding of collective animal motion has traditionally been driven by models based on phenomenological behavioral rules, but more recent work has…

Fluid Dynamics · Physics 2024-11-15 Mohamed Niged Mabrouk , Daniel Floryan

By means of classical density functional theory and its dynamical extension, we consider a colloidal fluid with spherically-symmetric competing interactions, which are well known to exhibit a rich bulk phase behavior. This includes complex…

Soft Condensed Matter · Physics 2018-06-11 Daniel Stopper , Roland Roth

We present a phase diagram for water confined to cylindrical silica nanopores in terms of pressure, temperature and pore radius. The confining cylindrical wall is hydrophilic and disordered, which has a destabilizing effect on ordered water…

Statistical Mechanics · Physics 2015-06-05 David T. Limmer , David Chandler

Flagellated bacteria are hydrodynamically attracted to rigid walls, yet past work shows a 'hovering' state where they swim stably at a finite height above surfaces. We use numerics and theory to reveal the physical origin of hovering.…

Biological Physics · Physics 2024-09-17 Pyae Hein Htet , Debasish Das , Eric Lauga

Marine ecosystems are in the spotlight, because environmental changes are threatening biodiversity and ecological functions. In this context, microalgae play key ecological roles both in planktonic and benthic ecosystems. Consequently, they…

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