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The paper demonstrates the optimization of the execution environment of a hybrid OpenMP+MPI computational fluid dynamics code (shallow water equation solver) on a cluster enabled with Intel Xeon Phi coprocessors. The discussion includes:…

Mathematical Software · Computer Science 2014-08-11 Andrey Vladimirov , Cliff Addison

In 2013 Intel introduced the Xeon Phi, a new parallel co-processor board. The Xeon Phi is a cache-coherent many-core shared memory architecture claiming CPU-like versatility, programmability, high performance, and power efficiency. The…

Performance · Computer Science 2014-11-10 S. Ali Mirsoleimani , Aske Plaat , Jos Vermaseren , Jaap van den Herik

The Intel Xeon Phi manycore processor is designed to provide high performance matrix computations of the type often performed in data analysis. Common data analysis environments include Matlab, GNU Octave, Julia, Python, and R. Achieving…

Given an array $\mathcal{A}$ of $n$ elements and a value $2 \leq k \leq n$, a frequent item or $k$-majority element is an element occurring in $\mathcal{A}$ more than $n/k$ times. The $k$-majority problem requires finding all of the…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-01-12 Massimo Cafaro , Marco Pulimeno , Italo Epicoco , Giovanni Aloisio

The current trend of multicore architectures on shared memory systems underscores the need of parallelism. While there are some programming model to express parallelism, thread programming model has become a standard to support these system…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-12-13 D. T. Hasta , A. B. Mutiara

We present our experience with the modernization on the GR-MHD code BHAC, aimed at improving its novel hybrid (MPI+OpenMP) parallelization scheme. In doing so, we showcase the use of performance profiling tools usable on x86 (Intel-based)…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-08-30 Salvatore Cielo , Oliver Porth , Luigi Iapichino , Anupam Karmakar , Hector Olivares , Chun Xia

The increasing number of processing elements and decreas- ing memory to core ratio in modern high-performance platforms makes efficient strong scaling a key requirement for numerical algorithms. In order to achieve efficient scalability on…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-01-14 Michael Lange , Gerard Gorman , Michele Weiland , Lawrence Mitchell , James Southern

A hybrid scheme that utilizes MPI for distributed memory parallelism and OpenMP for shared memory parallelism is presented. The work is motivated by the desire to achieve exceptionally high Reynolds numbers in pseudospectral computations of…

Computational Physics · Physics 2010-03-24 Pablo D. Mininni , Duane L. Rosenberg , Raghu Reddy , Annick Pouquet

Intel Xeon Phi is a recently released high-performance coprocessor which features 61 cores each supporting 4 hardware threads with 512-bit wide SIMD registers achieving a peak theoretical performance of 1Tflop/s in double precision. Many…

Performance · Computer Science 2013-02-06 Erik Saule , Kamer Kaya , Umit V. Catalyurek

Clusters of SMP nodes provide support for a wide diversity of parallel programming paradigms. Combining both shared memory and message passing parallelizations within the same application, the hybrid MPI-OpenMP paradigm is an emerging trend…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-11-13 Truong Vinh Truong Duy , Katsuhiro Yamazaki , Kosai Ikegami , Shigeru Oyanagi

With multi-core processors a ubiquitous building block of modern supercomputers, it is now past time to enable applications to embrace these developments in processor design. To achieve exascale performance, applications will need ways of…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-08-13 Michele Weiland , Lawrence Mitchell , Gerard Gorman , Stephan Kramer , Mark Parsons , James Southern

With at least 50 cores, Intel Xeon Phi is a true many-core architecture. Featuring fairly powerful cores, two cache levels, and very fast interconnections, the Xeon Phi can get a theoretical peak of 1000 GFLOPs and over 240 GB/s. These…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-12-23 Jianbin Fang , Ana Lucia Varbanescu , Henk Sips , Lilun Zhang , Yonggang Che , Chuanfu Xu

Many algorithms have been parallelized successfully on the Intel Xeon Phi coprocessor, especially those with regular, balanced, and predictable data access patterns and instruction flows. Irregular and unbalanced algorithms are harder to…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-07-17 S. Ali Mirsoleimani , Aske Plaat , Jaap van den Herik , Jos Vermaseren

The trend towards highly parallel multi-processing is ubiquitous in all modern computer architectures, ranging from handheld devices to large-scale HPC systems; yet many applications are struggling to fully utilise the multiple levels of…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-07-19 Michael Lange , Gerard Gorman , Michele Weiland , Lawrence Mitchell , Xiaohu Guo , James Southern

As fusion energy devices advance, plasma simulations are crucial for reactor design. Our work extends BIT1 hybrid parallelization by integrating MPI with OpenMP and OpenACC, focusing on asynchronous multi-GPU programming. Results show…

We discuss the computational bottlenecks in molecular dynamics (MD) and describe the challenges in parallelizing the computation intensive tasks. We present a hybrid algorithm using MPI (Message Passing Interface) with OpenMP threads for…

Computational Physics · Physics 2015-07-28 Anirban Pal , Abhishek Agarwala , Soumyendu Raha , Baidurya Bhattacharya

The advent of multi-/many-core processors in clusters advocates hybrid parallel programming, which combines Message Passing Interface (MPI) for inter-node parallelism with a shared memory model for on-node parallelism. Compared to the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-15 Huan Zhou , Jose Gracia , Ralf Schneider

Asymmetric multicore processors (AMPs) couple high-performance big cores and low-power small cores with the same instruction-set architecture but different features, such as clock frequency or microarchitecture. Previous work has shown that…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-13 Juan Carlos Saez , Fernando Castro , Manuel Prieto-Matias

MPI+Threads, embodied by the MPI/OpenMP hybrid programming model, is a parallel programming paradigm where threads are used for on-node shared-memory parallelization and MPI is used for multi-node distributed-memory parallelization. OpenMP…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-31 Hui Zhou , Ken Raffenetti , Junchao Zhang , Yanfei Guo , Rajeev Thakur

With the ease-of-programming, flexibility and yet efficiency, MapReduce has become one of the most popular frameworks for building big-data applications. MapReduce was originally designed for distributed-computing, and has been extended to…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-09-03 Mian Lu , Lei Zhang , Huynh Phung Huynh , Zhongliang Ong , Yun Liang , Bingsheng He , Rick Siow Mong Goh , Richard Huynh
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