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Accurate medical image segmentation is essential for diagnosis and treatment planning of diseases. Convolutional Neural Networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they are…

Image and Video Processing · Electrical Eng. & Systems 2020-11-05 Ran Gu , Guotai Wang , Tao Song , Rui Huang , Michael Aertsen , Jan Deprest , Sébastien Ourselin , Tom Vercauteren , Shaoting Zhang

In this paper, we adopt 3D Convolutional Neural Networks to segment volumetric medical images. Although deep neural networks have been proven to be very effective on many 2D vision tasks, it is still challenging to apply them to 3D tasks…

Computer Vision and Pattern Recognition · Computer Science 2018-08-03 Zhuotun Zhu , Yingda Xia , Wei Shen , Elliot K. Fishman , Alan L. Yuille

Deep learning-based methods have spearheaded the automatic analysis of echocardiographic images, taking advantage of the publication of multiple open access datasets annotated by experts (CAMUS being one of the largest public databases).…

Image and Video Processing · Electrical Eng. & Systems 2023-06-26 Hang Jung Ling , Nathan Painchaud , Pierre-Yves Courand , Pierre-Marc Jodoin , Damien Garcia , Olivier Bernard

Fully automatic cardiac segmentation can be a fast and reproducible method to extract clinical measurements from an echocardiography examination. The U-Net architecture is the current state-of-the-art deep learning architecture for medical…

Image and Video Processing · Electrical Eng. & Systems 2024-10-28 Gilles Van De Vyver , Sarina Thomas , Guy Ben-Yosef , Sindre Hellum Olaisen , Håvard Dalen , Lasse Løvstakken , Erik Smistad

Delineation of anatomical structures is often the first step of many medical image analysis workflows. While convolutional neural networks achieve high performance, these do not incorporate anatomical shape information. We introduce a novel…

Image and Video Processing · Electrical Eng. & Systems 2023-10-18 Athira J Jacob , Puneet Sharma , Daniel Ruckert

Patient-specific left ventricle (LV) myocardial models have the potential to be used in a variety of clinical scenarios for improved diagnosis and treatment plans. Cine cardiac magnetic resonance (MR) imaging provides high resolution images…

Image and Video Processing · Electrical Eng. & Systems 2021-04-01 Roshan Reddy Upendra , Brian Jamison Wentz , Richard Simon , Suzanne M. Shontz , Cristian A. Linte

We present a novel approach to automatically segment magnetic resonance (MR) images of the human brain into anatomical regions. Our methodology is based on a deep artificial neural network that assigns each voxel in an MR image of the brain…

Computer Vision and Pattern Recognition · Computer Science 2015-06-26 Alexandre de Brebisson , Giovanni Montana

Recent advances in deep learning, like 3D fully convolutional networks (FCNs), have improved the state-of-the-art in dense semantic segmentation of medical images. However, most network architectures require severely downsampling or…

Computer Vision and Pattern Recognition · Computer Science 2018-06-07 Holger R. Roth , Chen Shen , Hirohisa Oda , Takaaki Sugino , Masahiro Oda , Yuichiro Hayashi , Kazunari Misawa , Kensaku Mori

In this research project, we put forward an advanced method for airway segmentation based on the existent convolutional neural network (CNN) and graph neural network (GNN). The method is originated from the vessel segmentation, but we…

Image and Video Processing · Electrical Eng. & Systems 2021-10-01 Yihua Yang

Longitudinal analysis has great potential to reveal developmental trajectories and monitor disease progression in medical imaging. This process relies on consistent and robust joint 4D segmentation. Traditional techniques are dependent on…

Machine Learning · Computer Science 2019-06-19 Malav Bateriwala , Pierrick Bourgeat

Assessment of cardiovascular disease (CVD) with cine magnetic resonance imaging (MRI) has been used to non-invasively evaluate detailed cardiac structure and function. Accurate segmentation of cardiac structures from cine MRI is a crucial…

Image and Video Processing · Electrical Eng. & Systems 2021-07-23 Xiaofeng Liu , Fangxu Xing , Hanna K. Gaggin , Weichung Wang , C. -C. Jay Kuo , Georges El Fakhri , Jonghye Woo

This paper presents a fully automatic and end-to-end optimised airway segmentation method for thoracic computed tomography, based on the U-Net architecture. We use a simple and low-memory 3D U-Net as backbone, which allows the method to…

Image and Video Processing · Electrical Eng. & Systems 2021-08-04 A. Garcia-Uceda , R. Selvan , Z. Saghir , H. A. W. M. Tiddens , M. de Bruijne

Segmentation of brain structures from magnetic resonance (MR) scans plays an important role in the quantification of brain morphology. Since 3D deep learning models suffer from high computational cost, 2D deep learning methods are favored…

Image and Video Processing · Electrical Eng. & Systems 2021-03-09 Yuemeng Li , Hongming Li , Yong Fan

Assessing the location and extent of lesions caused by chronic stroke is critical for medical diagnosis, surgical planning, and prognosis. In recent years, with the rapid development of 2D and 3D convolutional neural networks (CNN), the…

Image and Video Processing · Electrical Eng. & Systems 2021-02-17 Yongjin Zhou , Weijian Huang , Pei Dong , Yong Xia , Shanshan Wang

Cardiovascular magnetic resonance (CMR) imaging has become a modality with superior power for the diagnosis and prognosis of cardiovascular diseases. One of the essential basic quality controls of CMR images is to investigate the complete…

Image and Video Processing · Electrical Eng. & Systems 2024-10-29 Shahabedin Nabavi , Mohammad Hashemi , Mohsen Ebrahimi Moghaddam , Ahmad Ali Abin , Alejandro F. Frangi

In recent years, Deep Learning (DL) has shown promising results in conducting AI tasks such as computer vision and image segmentation. Specifically, Convolutional Neural Network (CNN) models in DL have been applied to prevention,detection,…

Image and Video Processing · Electrical Eng. & Systems 2019-11-19 Ahmed Awad Albishri , Syed Jawad Hussain Shah , Anthony Schmiedler , Seung Suk Kang , Yugyung Lee

Segmentation of 3D images is a fundamental problem in biomedical image analysis. Deep learning (DL) approaches have achieved state-of-the-art segmentation perfor- mance. To exploit the 3D contexts using neural networks, known DL…

Computer Vision and Pattern Recognition · Computer Science 2021-03-23 Jianxu Chen , Lin Yang , Yizhe Zhang , Mark Alber , Danny Z. Chen

We recently published a deep learning study on the potential of encoder-decoder networks for the segmentation of the 2D CAMUS ultrasound dataset. We propose in this abstract an extension of the evaluation criteria to anatomical assessment,…

Atrial Fibrillation (AF) is a common electro-physiological cardiac disorder that causes changes in the anatomy of the atria. A better characterization of these changes is desirable for the definition of clinical biomarkers, furthermore,…

Machine Learning · Statistics 2018-09-28 Nicoló Savioli , Giovanni Montana , Pablo Lamata

Cardiac segmentation of atriums, ventricles, and myocardium in computed tomography (CT) images is an important first-line task for presymptomatic cardiovascular disease diagnosis. In several recent studies, deep learning models have shown…

Image and Video Processing · Electrical Eng. & Systems 2024-10-01 Sanguk Park , Minyoung Chung