Related papers: A universal tree-based network with the minimum nu…
We study the query complexity of determining if a graph is connected with global queries. The first model we look at is matrix-vector multiplication queries to the adjacency matrix. Here, for an $n$-vertex graph with adjacency matrix $A$,…
The structure of an evolving network contains information about its past. Extracting this information efficiently, however, is, in general, a difficult challenge. We formulate a fast and efficient method to estimate the most likely history…
We prove that one can perfectly pack degenerate graphs into complete or dense $n$-vertex quasirandom graphs, provided that all the degenerate graphs have maximum degree $o(\frac{n}{\log n})$, and in addition $\Omega(n)$ of them have at most…
Highly dynamic networks are characterized by frequent changes in the availability of communication links. These networks are often partitioned into several components, which split and merge unpredictably. We present a distributed algorithm…
Phylogenetic networks provide a more general description of evolutionary relationships than rooted phylogenetic trees. One way to produce a phylogenetic network is to randomly place $k$ arcs between the edges of a rooted binary phylogenetic…
Let $T$ be an oriented tree on $n$ vertices with maximum degree at most $e^{o(\sqrt{\log n})}$. If $G$ is a digraph on $n$ vertices with minimum semidegree $\delta^0(G)\geq(\frac12+o(1))n$, then $G$ contains $T$ as a spanning tree, as…
Hypertrees are linear hypergraphs where every two vertices are connected by a unique path. Elliott and R\"{o}dl conjectured that for any given $\mu>0$, there exists $n_0$ such that the following holds. Every $n$-vertex Steiner triple system…
Tanglegrams are a special class of graphs appearing in applications concerning cospeciation and coevolution in biology and computer science. They are formed by identifying the leaves of two rooted binary trees. We give an explicit formula…
We study the asymptotic behavior af the number of cuts $X(T_n)$ needed to isolate the root in a rooted binary random tree $T_n$ with $n$ leaves. We focus on the case of subtrees of the Continuum Random Tree generated by uniform sampling of…
Rooted phylogenetic networks provide a more complete representation of the ancestral relationship between species than phylogenetic trees when reticulate evolutionary processes are at play. One way to reconstruct a phylogenetic network is…
We study the average number of distinct fringe subtrees in random trees generated by leaf-centric binary tree sources as introduced by Zhang, Yang and Kieffer. A leaf-centric binary tree source induces for every $n \geq 2$ a probability…
We propose new succinct representations of ordinal trees, which have been studied extensively. It is known that any $n$-node static tree can be represented in $2n + o(n)$ bits and a number of operations on the tree can be supported in…
A caterpillar tree is a connected, acyclic, graph in which all vertices are either a member of a central path, or joined to that central path by a single edge. In other words, caterpillar trees are the class of trees which become path…
We give exact relations for certain types of the hierarchic fractal structures. In the blatant distinction from regular networks of the "small world" (SW) topology [1], regular fractal networks manifests the logarithmic dependence of the…
In recent decades, phylogenetic networks have become a standard tool in modeling evolutionary processes. Nevertheless, basic combinatorial questions about them are still largely open. For instance, even the asymptotic counting problem for…
The generation of trees with a specified tree edit distance has significant applications across various fields, including computational biology, structured data analysis, and image processing. Recently, generative networks have been…
Broadcasting and convergecasting are pivotal services in distributed systems, in particular, in wireless ad-hoc and sensor networks, which are characterized by time- varying communication graphs. We study the question of whether it is…
Maxmin trees are labeled trees with the property that each vertex is either a local maximum or a local minimum. Such trees were originally introduced by Postnikov, who gave a formula to count them and different combinatorial interpretations…
The structure of networks that provide optimal transport properties has been investigated in a variety of contexts. While many different formulations of this problem have been considered, it is recurrently found that optimal networks are…
Tree-child networks are a recently-described class of directed acyclic graphs that have risen to prominence in phylogenetics (the study of evolutionary trees and networks). Although these networks have a number of attractive mathematical…