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Maintaining a $k$-core decomposition quickly in a dynamic graph has important applications in network analysis. The main challenge for designing efficient exact algorithms is that a single update to the graph can cause significant global…

Data Structures and Algorithms · Computer Science 2023-09-28 Quanquan C. Liu , Jessica Shi , Shangdi Yu , Laxman Dhulipala , Julian Shun

Motivation: Many biochemical pathways are known, but the numerous parameters required to correctly explore the dynamics of the pathways are not known. For this reason, algorithms that can make inferences by looking at the topology of a…

Molecular Networks · Quantitative Biology 2009-07-23 Deepak Chandran , Herbert M. Sauro

In their breakthrough ICALP'15 paper, Bernstein and Stein presented an algorithm for maintaining a $(3/2+\epsilon)$-approximate maximum matching in fully dynamic {\em bipartite} graphs with a {\em worst-case} update time of…

Data Structures and Algorithms · Computer Science 2021-08-20 Fabrizio Grandoni , Chris Schwiegelshohn , Shay Solomon , Amitai Uzrad

In this paper, we develop efficient exact and approximate algorithms for computing a maximum independent set in random graphs. In a random graph $G$, each pair of vertices are joined by an edge with a probability $p$, where $p$ is a…

Data Structures and Algorithms · Computer Science 2013-08-08 Yinglei Song

We introduce a new notation for representing labeled regular bipartite graphs of arbitrary degree. Several enumeration problems for labeled and unlabeled regular bipartite graphs have been introduced. A general algorithm for enumerating all…

Discrete Mathematics · Computer Science 2015-12-31 Vivek S. Nittoor

We study the fully dynamic maximum matching problem. In this problem, the goal is to efficiently maintain an approximate maximum matching of a graph that is subject to edge insertions and deletions. Our focus is on algorithms that maintain…

Data Structures and Algorithms · Computer Science 2024-09-26 Soheil Behnezhad , Alma Ghafari

In Bipartite Correlation Clustering (BCC) we are given a complete bipartite graph $G$ with `+' and `-' edges, and we seek a vertex clustering that maximizes the number of agreements: the number of all `+' edges within clusters plus all `-'…

Data Structures and Algorithms · Computer Science 2016-03-10 Megasthenis Asteris , Anastasios Kyrillidis , Dimitris Papailiopoulos , Alexandros G. Dimakis

A spin system is a framework in which the vertices of a graph are assigned spins from a finite set. The interactions between neighbouring spins give rise to weights, so a spin assignment can also be viewed as a weighted graph homomorphism.…

Data Structures and Algorithms · Computer Science 2021-04-15 Andreas Galanis , Leslie Ann Goldberg , James Stewart

We consider the problem of learning the weighted edges of a balanced mixture of two undirected graphs from epidemic cascades. While mixture models are popular modeling tools, algorithmic development with rigorous guarantees has lagged.…

Social and Information Networks · Computer Science 2020-01-30 Jessica Hoffmann , Soumya Basu , Surbhi Goel , Constantine Caramanis

Neural networks for structured data like graphs have been studied extensively in recent years. To date, the bulk of research activity has focused mainly on static graphs. However, most real-world networks are dynamic since their topology…

Machine Learning · Computer Science 2020-03-03 Changmin Wu , Giannis Nikolentzos , Michalis Vazirgiannis

We address the problem of computing a dynamic visualization of a geometric graph $G$ as a sequence of frames. Each frame shows only a portion of the graph but their union covers $G$ entirely. The two main requirements of our dynamic…

We consider the algorithmic problem of finding large \textit{balanced} independent sets in sparse random bipartite graphs, and more generally the problem of finding independent sets with specified proportions of vertices on each side of the…

Data Structures and Algorithms · Computer Science 2023-07-27 Will Perkins , Yuzhou Wang

We propose improved exact and heuristic algorithms for solving the maximum weight clique problem, a well-known problem in graph theory with many applications. Our algorithms interleave successful techniques from related work with novel data…

Data Structures and Algorithms · Computer Science 2023-02-02 Roman Erhardt , Kathrin Hanauer , Nils Kriege , Christian Schulz , Darren Strash

Dense subgraph search in bipartite graphs is a fundamental problem in graph analysis, with wide-ranging applications in fraud detection, recommendation systems, and social network analysis. The recently proposed $(\alpha, \beta)$-dense…

Databases · Computer Science 2025-08-27 Yalong Zhang , Rong-Hua Li , Qi Zhang , Guoren Wang

On an evolving graph that is continuously updated by a high-velocity stream of edges, how can one efficiently maintain if two vertices are connected? This is the connectivity problem, a fundamental and widely studied problem on graphs. We…

Data Structures and Algorithms · Computer Science 2016-02-18 Natcha Simsiri , Kanat Tangwongsan , Srikanta Tirthapura , Kun-Lung Wu

Given a finite sequence of graphs, e.g., coming from technological, biological, and social networks, the paper proposes a methodology to identify possible changes in stationarity in the stochastic process generating the graphs. In order to…

Machine Learning · Statistics 2021-02-11 Daniele Zambon , Cesare Alippi , Lorenzo Livi

Graph clustering is a challenging pattern recognition problem whose goal is to identify vertex partitions with high intra-group connectivity. This paper investigates a bi-objective problem that maximizes the number of intra-cluster edges of…

Social and Information Networks · Computer Science 2019-09-10 Camila P. S. Tautenhain , Mariá C. V. Nascimento

This paper is devoted to the online dominating set problem and its variants. We believe the paper represents the first systematic study of the effect of two limitations of online algorithms: making irrevocable decisions while not knowing…

Data Structures and Algorithms · Computer Science 2018-09-14 Joan Boyar , Stephan J. Eidenbenz , Lene M. Favrholdt , Michal Kotrbčík , Kim S. Larsen

We study experiment design for unique identification of the causal graph of a simple SCM, where the graph may contain cycles. The presence of cycles in the structure introduces major challenges for experiment design as, unlike acyclic…

Machine Learning · Computer Science 2023-12-15 Ehsan Mokhtarian , Saber Salehkaleybar , AmirEmad Ghassami , Negar Kiyavash

We address the problem of predicting the labeling of a graph in an online setting when the labeling is changing over time. We present an algorithm based on a specialist approach; we develop the machinery of cluster specialists which…

Machine Learning · Computer Science 2019-06-18 Mark Herbster , James Robinson
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