Related papers: Combinatorial properties of triplet covers for bin…
An important problem in evolutionary biology is to reconstruct the evolutionary history of a set $X$ of species. This history is often represented as a phylogenetic network, that is, a connected graph with leaves labelled by elements in $X$…
A (Euclidean) greedy drawing of a graph is a drawing in which, for any two vertices $s,t$ ($s \neq t$), there is a neighbor vertex of $s$ that is closer to $t$ than to $s$ in the Euclidean distance. Greedy drawings are important in the…
A combinatorial presentation of closed orientable 3-manifolds as bi-tricolored links is given together with two versions of a calculus via moves to manipulate bi-tricolored links without changing the represented manifold. That is, we…
A variant of the Erd\H{o}s-S\'os conjecture, posed by Havet, Reed, Stein and Wood, states that every graph with minimum degree at least $\lfloor 2k/3 \rfloor$ and maximum degree at least $k$ contains a copy of every tree with $k$ edges.…
We prove that any two finite-area non-compact hyperbolic Riemann surfaces S and T have finite covers that are arbitrarily close in the normalized Weil-Petersson metric, where we normalize by dividing the square of the metric by the area of…
Given a positive singular hermitian metric of a pseudoeffective line bundle on a complex Kaehler manifold, a singular foliation is constructed satisfying certain analytic analogues of numerical conditions. This foliation refines Tsuji's…
A tree is scattered if no subdivision of the complete binary tree is a subtree. Building on results of Halin, Polat and Sabidussi, we identify four types of subtrees of a scattered tree and a function of the tree into the integers at least…
Plane increasing trees are rooted labeled trees embedded into the plane such that the sequence of labels is increasing on any branch starting at the root. Relaxed binary trees are a subclass of unlabeled directed acyclic graphs. We…
We consider packing tree degree sequences in this paper. We set up a conjecture that any arbitrary number of tree degree sequences without common leaves have edge disjoint tree realizations. This conjecture is known to be true for $2$ and…
We study non-compact surfaces obtained by gluing strips $\mathbb{R}\times(-1,1)$ with at most countably many boundary intervals along some these intervals. Every such strip possesses a foliation by parallel lines, which gives a foliation on…
We consider special cases of the two tree degree sequences problem. We show that if two tree degree sequences do not have common leaves then they always have edge-disjoint caterpillar realizations. By using a probabilistic method, we prove…
Agol recently introduced the concept of a veering taut triangulation, which is a taut triangulation with some extra combinatorial structure. We define the weaker notion of a "veering triangulation" and use it to show that all veering…
A contraction sequence of a graph consists of iteratively merging two of its vertices until only one vertex remains. The recently introduced twin-width graph invariant is based on contraction sequences. More precisely, if one puts red edges…
It has remained an open question for some time whether, given a set of not necessarily binary (i.e. "nonbinary") trees T on a set of taxa X, it is possible to determine in time f(r).poly(m) whether there exists a phylogenetic network that…
The three-in-a-tree algorithm of Chudnovsky and Seymour decides in time $O(n^4)$ whether three given vertices of a graph belong to an induced tree. Here, we study four-in-a-tree for triangle-free graphs. We give a structural answer to the…
We present a deterministic algorithm that given a tree T with n vertices, a starting vertex v and a slackness parameter epsilon > 0, estimates within an additive error of epsilon the cover and return time, namely, the expected time it takes…
Three standard subtree transfer operations for binary trees, used in particular for phylogenetic trees, are: tree bisection and reconnection ($TBR$), subtree prune and regraft ($SPR$) and rooted subtree prune and regraft ($rSPR$). For a…
The interleaving distance is a key tool for comparing merge trees, which provide topological summaries of scalar functions. In this work, we define an average merge tree for a pair of merge trees using the interleaving distance. Since such…
We study partially and totally associative ternary algebras of first and second kind. Assuming the vector space underlying a ternary algebra to be a topological space and a triple product to be continuous mapping we consider the trivial…
Let $\mathcal{T}$ be an unrooted binary tree with $n$ distinctly labelled leaves. Deriving its name from the field of phylogenetics, a convex character on $\mathcal{T}$ is simply a partition of the leaves such that the minimal spanning…