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Despite advancements in the areas of parallel and distributed computing, the complexity of programming on High Performance Computing (HPC) resources has deterred many domain experts, especially in the areas of machine learning and…

We present new versions of the previously published C and CUDA programs for solving the dipolar Gross-Pitaevskii equation in one, two, and three spatial dimensions, which calculate stationary and non-stationary solutions by propagation in…

High-Performance Computing (HPC) platforms enable scientific software to achieve breakthroughs in many research fields such as physics, biology, and chemistry, by employing Research Software Engineering (RSE) techniques. These include 1)…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-16 Matan Rusanovsky , Re'em Harel , Lee-or Alon , Idan Mosseri , Harel Levin , Gal Oren

The growing memory demands of modern applications have driven the adoption of far memory technologies in data centers to provide cost-effective, high-capacity memory solutions. However, far memory presents new performance challenges because…

Hardware Architecture · Computer Science 2024-04-18 Luming Wang , Xu Zhang , Songyue Wang , Zhuolun Jiang , Tianyue Lu , Mingyu Chen , Siwei Luo , Keji Huang

Previous work has shown that there are two major complexity barriers in the synthesis of fault-tolerant distributed programs: (1) generation of fault-span, the set of states reachable in the presence of faults, and (2) resolving deadlock…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-12-15 Fuad Abujarad , Borzoo Bonakdarpour , Sandeep S. Kulkarni

Heterogeneous computing is becoming mainstream in all scopes. This new era in computer architecture brings a new paradigm called Accelerator Level Parallelism (ALP). In ALP, accelerators are used concurrently to provide unprecedented levels…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-22 Pablo Antonio Martínez , Gregorio Bernabé , Jose Manuel García

Traditional heterogeneous parallel algorithms, designed for heterogeneous clusters of workstations, are based on the assumption that the absolute speed of the processors does not depend on the size of the computational task. This assumption…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-09-15 Alexey Lastovetsky , Ravi Reddy , Vladimir Rychkov , David Clarke

This paper focuses on automated synthesis of divide-and-conquer parallelism, which is a common parallel programming skeleton supported by many cross-platform multithreaded libraries. The challenges of producing (manually or automatically) a…

Programming Languages · Computer Science 2017-01-31 Azadeh Farzan , Victor Nicolet

Despite widespread interest in multicore computing, concur- rency models in mainstream languages often lead to subtle, error-prone code. Observationally Cooperative Multithreading (OCM) is a new approach to shared-memory parallelism.…

High-dimensional omics datasets are routinely visualized as heatmaps, where color intensities reveal co-expression patterns and correlations. However, modern omics technologies increasingly generate matrices so large that existing visual…

Genomics · Quantitative Biology 2026-04-21 Osho Rawal , Rex Lu , Edgar Gonzalez-Kozlova , Sacha Gnjatic , Zeynep H. Gümüş

Prompt-learning has become a new paradigm in modern natural language processing, which directly adapts pre-trained language models (PLMs) to $cloze$-style prediction, autoregressive modeling, or sequence to sequence generation, resulting in…

Computation and Language · Computer Science 2021-11-04 Ning Ding , Shengding Hu , Weilin Zhao , Yulin Chen , Zhiyuan Liu , Hai-Tao Zheng , Maosong Sun

Space is a circuit oriented, spatial programming language designed to exploit the massive parallelism available in a novel formal model of computation called the Synchronic A-Ram, and physically related FPGA and reconfigurable…

Computation and Language · Computer Science 2010-08-31 Alex V Berka

We present GSPMD, an automatic, compiler-based parallelization system for common machine learning computations. It allows users to write programs in the same way as for a single device, then give hints through a few annotations on how to…

Programs with high levels of complexity often face challenges in adjusting execution parameters, particularly when these parameters vary based on the execution context. These dynamic parameters significantly impact the program's…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-18 Joao B. Fernandes , Felipe H. S. da Silva , Samuel Xavier-de-Souza , Italo A. S. Assis

To achieve high performance on modern computers, it is vital to map algorithmic parallelism to that inherent in the hardware. From an application developer's perspective, it is also important that code can be maintained in a portable manner…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-06-20 Alan Gray , Kevin Stratford

Motivated by large-scale optimization problems arising in the context of machine learning, there have been several advances in the study of asynchronous parallel and distributed optimization methods during the past decade. Asynchronous…

Machine Learning · Computer Science 2020-06-25 Mahmoud Assran , Arda Aytekin , Hamid Feyzmahdavian , Mikael Johansson , Michael Rabbat

The advent of multi-/many-core processors in clusters advocates hybrid parallel programming, which combines Message Passing Interface (MPI) for inter-node parallelism with a shared memory model for on-node parallelism. Compared to the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-15 Huan Zhou , Jose Gracia , Ralf Schneider

We present Matrix Distributed Processing, a C++ library for fast development of efficient parallel algorithms. MDP is based on MPI and consists of a collection of C++ classes and functions such as lattice, site and field. Once an algorithm…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Massimo Di Pierro

This paper addresses the problem of providing a novel approach to sourcing significant training data for LLMs focused on science and engineering. In particular, a crucial challenge is sourcing parallel scientific codes in the ranges of…

Software Engineering · Computer Science 2025-05-06 Matthew T. Dearing , Yiheng Tao , Xingfu Wu , Zhiling Lan , Valerie Taylor

Answer Set Programming (ASP) is a powerful logic-based programming language, which is enjoying increasing interest within the scientific community and (very recently) in industry. The evaluation of ASP programs is traditionally carried out…

Programming Languages · Computer Science 2011-10-14 Simona Perri , Francesco Ricca , Marco Sirianni