Related papers: Improved bounds for testing Dyck languages
A vector addition system (VAS) with an initial and a final marking and transition labels induces a language. In part because the reachability problem in VAS remains far from being well-understood, it is difficult to devise decision…
I study group theory (Kleiss-Kuijf) relations between purely multi-quark primitive amplitudes at tree level, and prove that they reduce the number of independent primitives to (n-2)!/(n/2)!, where n is the number of quarks plus antiquarks,…
Let $D$ be a set of positive integers. A $D$-diffsequence of length $k$ is a sequence of positive integers $a_1 < \cdots < a_k$ such that $a_{i+1}-a_i\in D$ for $i=1,\ldots,k-1$. For $D=\{2^i\mid i\in \mathbb{Z}_{\ge 0}\}$, it is known that…
Designing short DNA words is a problem of constructing a set (i.e., code) of n DNA strings (i.e., words) with the minimum length such that the Hamming distance between each pair of words is at least k and the n words satisfy a set of…
In this paper we consider the $p$-Norm Hamming Centroid problem which asks to determine whether some given binary strings have a centroid with a bound on the $p$-norm of its Hamming distances to the strings. Specifically, given a set of…
A regular language $L$ is said to be prime, if it is not the product of two non-trivial languages. Martens et al. settled the exact complexity of deciding primality for deterministic finite automata in 2010. For finite languages, Mateescu…
We propose a novel scaling law for general-purpose decoder-only language models (LMs) trained on multilingual data, tackling the problem of balancing languages during multilingual pretraining. A primary challenge in studying multilingual…
Separation is a classical problem in mathematics and computer science. It asks whether, given two sets belonging to some class, it is possible to separate them by another set of a smaller class. We present and discuss the separation problem…
Described are two algorithms to find long approximate palindromes in a string, for example a DNA sequence. A simple algorithm requires O(n)-space and almost always runs in $O(k.n)$-time where n is the length of the string and k is the…
We study the classical approximate string matching problem, that is, given strings $P$ and $Q$ and an error threshold $k$, find all ending positions of substrings of $Q$ whose edit distance to $P$ is at most $k$. Let $P$ and $Q$ have…
Motivated by applications in polymer-based data storage, we study the problem of reconstructing a string from part of its composition multiset. We give a full description of the structure of the strings that cannot be uniquely reconstructed…
Separation is a classical problem asking whether, given two sets belonging to some class, it is possible to separate them by a set from a smaller class. We discuss the separation problem for regular languages. We give a Ptime algorithm to…
A weighted string over an alphabet of size $\sigma$ is a string in which a set of letters may occur at each position with respective occurrence probabilities. Weighted strings, also known as position weight matrices or uncertain sequences,…
We revisit classic string problems considered in the area of parameterized complexity, and study them through the lens of dynamic data structures. That is, instead of asking for a static algorithm that solves the given instance efficiently,…
This paper presents a fully self-supervised approach to borrowing detection in multilingual wordlists. The method combines two sources of information: PMI similarities based on a global correspondence model and a lightweight contrastive…
We study the complexity of the problem of searching for a set of patterns that separate two given sets of strings. This problem has applications in a wide variety of areas, most notably in data mining, computational biology, and in…
A locally threshold testable language L is a language with the property that for some non negative integers k and l and for some word u from L, a word v belongs to L if and only if (1) the prefixes [suffixes] of length k-1 of words u and v…
We revisit various string indexing problems with range reporting features, namely, position-restricted substring searching, indexing substrings with gaps, and indexing substrings with intervals. We obtain the following main results.…
The separability problem for word languages of a class $\mathcal{C}$ by languages of a class $\mathcal{S}$ asks, for two given languages $I$ and $E$ from $\mathcal{C}$, whether there exists a language $S$ from $\mathcal{S}$ that includes…
Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In the \emph{deterministic} variant the goal is to solve the string…