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We consider an asexual population under strong selection-weak mutation conditions evolving on rugged fitness landscapes with many local fitness peaks. Unlike the previous studies in which the initial fitness of the population is assumed to…

Populations and Evolution · Quantitative Biology 2011-11-18 Kavita Jain , Sarada Seetharaman

The problem of natural selection in dispersal-structured populations consisting of individuals characterized by different diffusion coefficients is studied. The competition between the organisms is taken into account through the assumption…

Adaptation and Self-Organizing Systems · Physics 2020-05-01 E. Heinsalu , D. Navidad Maeso , M. Patriarca

The growth rate of organisms depends both on external conditions and on internal states, such as the expression levels of various genes. We show that to achieve a criterion mean growth rate over an ensemble of conditions, the internal…

Populations and Evolution · Quantitative Biology 2007-12-31 Samuel F. Taylor , Naftali Tishby , William Bialek

Temporal environmental variations are ubiquitous in nature, yet most of the theoretical works in population genetics and evolution assume fixed environment. Here we analyze the effect of variations in carrying capacity on the fate of a…

Populations and Evolution · Quantitative Biology 2019-12-16 Immanuel Meyer , Nadav M. Shnerb

The role of the selection pressure and mutation amplitude on the behavior of a single-species population evolving on a two-dimensional lattice, in a periodically changing environment, is studied both analytically and numerically. The…

Populations and Evolution · Quantitative Biology 2009-11-13 Ioana Bena , Michel Droz , Janusz Szwabinski , Andrzej Pekalski

System-environment interactions are intrinsically nonlinear and dependent on the interplay between many degrees of freedom. The complexity may be even more pronounced when one aims to describe biologically motivated systems. In that case,…

Statistical Mechanics · Physics 2014-07-07 L. A. da Silva , E. H. Colombo , C. Anteneodo

The growth of complex populations, such as microbial communities, forests, and cities, occurs over vastly different spatial and temporal scales. Although research in different fields has developed detailed, system-specific models to…

Populations and Evolution · Quantitative Biology 2023-09-14 Ashish B. George , James O'Dwyer

Microorganisms live in environments that inevitably fluctuate between mild and harsh conditions. As harsh conditions may cause extinctions, the rate at which fluctuations occur can shape microbial communities and their diversity, but we…

Populations and Evolution · Quantitative Biology 2021-10-14 Shota Shibasaki , Mauro Mobilia , Sara Mitri

The influence of an external random field on the competition process in a nonlinear open spatially extended system is analyzed numerically. A three-component model is chosen as the competition model in which a "weak" species can move in…

Pattern Formation and Solitons · Physics 2015-12-02 S. E. Kurushina , V. V. Maximov , E. A. Shapovalova , Yu. M. Romanovskii , I. P. Zavershinskii , D. S. Garipov

Since steep declines in a population's size also typically alter its composition, population bottlenecks are considered highly important for evolution. However, despite such significance, the mechanisms governing the impact of a given…

Populations and Evolution · Quantitative Biology 2022-06-28 Emanuele Crosato , Jeffrey N. Philippson , Shashi Thutupalli , Richard G. Morris

Predicting the adaptation of populations to a changing environment is crucial to assess the impact of human activities on biodiversity. Many theoretical studies have tackled this issue by modeling the evolution of quantitative traits…

Analysis of PDEs · Mathematics 2022-06-28 Jimmy Garnier , O Cotto , T Bourgeron , E Bouin , T Lepoutre , O Ronce , V Calvez

Understanding if and how mutants reach fixation in populations is an important question in evolutionary biology. We study the impact of population growth has on the success of mutants. To systematically understand the effects of growth we…

Populations and Evolution · Quantitative Biology 2017-03-29 Peter Ashcroft , Cassandra E. R. Smith , Matthew Garrod , Tobias Galla

Finite-size fluctuations arising in the dynamics of competing populations may have dramatic influence on their fate. As an example, in this article, we investigate a model of three species which dominate each other in a cyclic manner.…

Populations and Evolution · Quantitative Biology 2011-12-20 Tobias Reichenbach , Mauro Mobilia , Erwin Frey

Dynamics of a social population is analyzed taking into account some physical constraints on individual behavior and decision making abilities. The model, based on Evolutionary Game Theory, predicts that a population has to pass through a…

Populations and Evolution · Quantitative Biology 2007-05-23 Alex Feigel

Over the last two decades, several methods have been proposed for stabilizing the dynamics of biological populations. However, these methods have typically been evaluated using different population dynamics models and in the context of very…

Populations and Evolution · Quantitative Biology 2013-12-03 Sudipta Tung , Abhishek Mishra , Sutirth Dey

We consider an asexual biological population of constant size $N$ evolving in discrete time under the influence of selection and mutation. Beneficial mutations appear at rate $U$ and their selective effects $s$ are drawn from a distribution…

Populations and Evolution · Quantitative Biology 2015-05-14 Su-Chan Park , Damien Simon , Joachim Krug

Epochal dynamics, in which long periods of stasis in an evolving population are punctuated by a sudden burst of change, is a common behavior in both natural and artificial evolutionary processes. We analyze the population dynamics for a…

adap-org · Physics 2007-05-23 Erik van Nimwegen , James P. Crutchfield

Biodiversity widely observed in ecological systems is attributed to the dynamical balance among the competing species. The time-varying populations of the interacting species are often captured rather well by a set of deterministic…

Populations and Evolution · Quantitative Biology 2010-05-25 Yen-Chih Lin , Tzay-Ming Hong , Hsiu-Hau Lin

The spatial scale of population synchrony gives the characteristic distance at which the population fluctuations are correlated. Therefore, it gives also the characteristic size of the regions of simultaneous population depletion, or even…

Populations and Evolution · Quantitative Biology 2020-12-22 Miguel Ángel Fernández-Grande , Francisco Javier Cao-Garcia

Biological populations are subject to fluctuating environmental conditions. Different adaptive strategies can allow them to cope with these fluctuations: specialization to one particular environmental condition, adoption of a generalist…

Populations and Evolution · Quantitative Biology 2017-09-27 Andreas Mayer , Thierry Mora , Olivier Rivoire , Aleksandra M. Walczak