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Bump-hunting or mode identification is a fundamental problem that arises in almost every scientific field of data-driven discovery. Surprisingly, very few data modeling tools are available for automatic (not requiring manual case-by-base…

Methodology · Statistics 2016-11-10 Subhadeep Mukhopadhyay

Plant phenology and phenotype prediction using remote sensing data are increasingly gaining attention within the plant science community as a promising approach to enhance agricultural productivity. This work focuses on generating synthetic…

Computer Vision and Pattern Recognition · Computer Science 2025-02-18 Debasmita Pal , Arun Ross

Phylogenetic trees are pervasively used to depict evolutionary relationships. Increasingly, researchers need to visualize large trees and compare multiple large trees inferred for the same set of taxa (reflecting uncertainty in the tree…

Populations and Evolution · Quantitative Biology 2016-04-21 Oscar Robinson , David Dylus , Christophe Dessimoz

Plant phenotyping refers to a quantitative description of the plants properties, however in image-based phenotyping analysis, our focus is primarily on the plants anatomical, ontogenetical and physiological properties.This technique…

Computer Vision and Pattern Recognition · Computer Science 2022-10-25 Petros N. Tamvakis , Chairi Kiourt , Alexandra D. Solomou , George Ioannakis , Nestoras C. Tsirliganis

This paper introduces an innovative method for conducting conditional independence testing in high-dimensional data, facilitating the automated discovery of significant associations within distinct subgroups of a population, all while…

Methodology · Statistics 2023-09-19 Matteo Sesia , Tianshu Sun

Haplotype Inference is a challenging problem in bioinformatics that consists in inferring the basic genetic constitution of diploid organisms on the basis of their genotype. This information allows researchers to perform association studies…

Artificial Intelligence · Computer Science 2007-08-06 Luca Di Gaspero , Andrea Roli

Psychological network approaches propose to see symptoms or questionnaire items as interconnected nodes, with links between them reflecting pairwise statistical dependencies evaluated cross-sectional, time-series, or panel data. These…

Complex systems are often driven by higher-order interactions among multiple units, naturally represented as hypergraphs. Understanding dependency structures within these hypergraphs is crucial for understanding and predicting the behavior…

Social and Information Networks · Computer Science 2025-05-29 John Hood , Caterina De Bacco , Aaron Schein

Multilevel selection occurs when short-term individual-level reproductive interests conflict with longer-term group-level fitness effects. Detecting and quantifying this phenomenon is key to understanding evolution of traits ranging from…

Populations and Evolution · Quantitative Biology 2026-01-12 Matthew Andres Moreno , Sanaz Hasanzadeh Fard , Luis Zaman , Emily Dolson

Building agents that can explore their environments intelligently is a challenging open problem. In this paper, we make a step towards understanding how a hierarchical design of the agent's policy can affect its exploration capabilities.…

Machine Learning · Computer Science 2018-11-19 Maruan Al-Shedivat , Lisa Lee , Ruslan Salakhutdinov , Eric Xing

The future of the agriculture industry is intertwined with automation. Accurate fruit detection, yield estimation, and harvest time estimation are crucial for optimizing agricultural practices. These tasks can be carried out by robots to…

Computer Vision and Pattern Recognition · Computer Science 2024-11-05 Parham Jafary , Anna Bazangeya , Michelle Pham , Lesley G. Campbell , Sajad Saeedi , Kourosh Zareinia , Habiba Bougherara

The production of food, feed, fiber, and fuel is a key task of agriculture, which has to cope with many challenges in the upcoming decades, e.g., a higher demand, climate change, lack of workers, and the availability of arable land. Vision…

Computer Vision and Pattern Recognition · Computer Science 2024-07-25 Jan Weyler , Federico Magistri , Elias Marks , Yue Linn Chong , Matteo Sodano , Gianmarco Roggiolani , Nived Chebrolu , Cyrill Stachniss , Jens Behley

The analysis of spatio-temporal data presents significant challenges due to the complexity and heterogeneity of movement patterns. This project proposes a data analytics tool that combines data visualization and statistical computation to…

Human-Computer Interaction · Computer Science 2025-08-01 Ivan A. Hanono Cozzetti , Ahmad Abdou

Data visualizations can reveal trends and patterns that are not otherwise obvious from the raw data or summary statistics. While visualizing low-dimensional data is relatively straightforward (for example, plotting the change in a variable…

Other Statistics · Statistics 2017-01-31 Andrew C. Heusser , Kirsten Ziman , Lucy L. W. Owen , Jeremy R. Manning

Statisticians increasingly face the problem to reconsider the adaptability of classical inference techniques. In particular, divers types of high-dimensional data structures are observed in various research areas; disclosing the boundaries…

Statistics Theory · Mathematics 2017-06-09 Paavo Sattler , Markus Pauly

High-throughput pheno-, geno-, and envirotyping allows characterization of plant genotypes and the trials they are evaluated in, producing different types of data. These different data modalities can be integrated into statistical or…

We consider the problem of detecting and estimating the strength of association between a trait of interest and alleles or haplotypes in a small genomic region (e.g. a gene or a gene complex), when no direct information on that region is…

Applications · Statistics 2008-04-11 Rodrigo Labouriau , Poul Sørensen , Helle R. Juul-Madsen

Morphological profiling is a valuable tool in phenotypic drug discovery. The advent of high-throughput automated imaging has enabled the capturing of a wide range of morphological features of cells or organisms in response to perturbations…

It is of great interest to quantify the contributions of genetic variation to brain structure and function, which are usually measured by high-dimensional imaging data (e.g., magnetic resonance imaging). In addition to the variance, the…

Applications · Statistics 2020-05-05 Benjamin B. Risk , Hongtu Zhu

Collective cell migration plays a crucial role in numerous biological processes, including tumour growth, wound healing, and the immune response. Often, the migrating population consists of cells with various different phenotypes. This…

Populations and Evolution · Quantitative Biology 2025-04-01 Rebecca M. Crossley , Philip K. Maini , Ruth E. Baker