Related papers: Topological Sorting under Regular Constraints
Suppose N is a phylogenetic network indicating a complicated relationship among individuals and taxa. Often of interest is a much simpler network, for example, a species tree T, that summarizes the most fundamental relationships. The…
One of the driving problems in the CSP area is the Dichotomy Conjecture, formulated in 1993 by Feder and Vardi [STOC'93], stating that for any fixed relational structure G the Constraint Satisfaction Problem CSP(G) is either NP--complete or…
Given a graph $G=(V,E)$, the dominating set problem asks for a minimum subset of vertices $D\subseteq V$ such that every vertex $u\in V\setminus D$ is adjacent to at least one vertex $v\in D$. That is, the set $D$ satisfies the condition…
We consider the problem of clustering with $K$-means and Gaussian mixture models with a constraint on the separation between the centers in the context of real-valued data. We first propose a dynamic programming approach to solving the…
In this paper, we define the reoptimization variant of the closest substring problem (CSP) under sequence addition. We show that, even with the additional information we have about the problem instance, the problem of finding a closest…
We study {\sc Cluster Edge Modification} problems with constraints on the size of the clusters. A graph $G$ is a cluster graph if every connected component of $G$ is a clique. In a typical {\sc Cluster Edge Modification} problem such as the…
We prove that finding a $k$-edge induced subgraph is fixed-parameter tractable, thereby answering an open problem of Leizhen Cai. Our algorithm is based on several combinatorial observations, Gauss' famous \emph{Eureka} theorem [Andrews,…
We revisit a classical crossword filling puzzle which already appeared in Garey\&Jonhson's book. We are given a grid with $n$ vertical and horizontal slots and a dictionary with $m$ words and are asked to place words from the dictionary in…
We initiate a complexity theoretic study of the language based graph reachability problem (L-REACH) : Fix a language L. Given a graph whose edges are labeled with alphabet symbols of the language L and two special vertices s and t, test if…
We consider Stable Marriage with Covering Constraints (SMC): in this variant of Stable Marriage, we distinguish a subset of women as well as a subset of men, and we seek a matching with fewest number of blocking pairs that matches all of…
This paper proposes KC-TSS: K-Clustered-Traveling Salesman Based Search, a failure resilient path planning algorithm for heterogeneous robot teams performing target search in human environments. We separate the sample path generation…
The Soft Happy Colouring (SHC) problem, a mathematical framework for identifying homophilic network structures, seeks to maximise the number of $\rho$-happy vertices, i.e. vertices with at least a proportion $\rho$ of neighbours that share…
We address the separability problem for straight-line string constraints. The separability problem for languages of a class C by a class S asks: given two languages A and B in C, does there exist a language I in S separating A and B (i.e.,…
The complexity of graph homomorphism problems has been the subject of intense study. It is a long standing open problem to give a (decidable) complexity dichotomy theorem for the partition function of directed graph homomorphisms. In this…
Graph clustering is a fundamental technique in data analysis with applications in many different fields. While there is a large body of work on clustering undirected graphs, the problem of clustering directed graphs is much less understood.…
One of the key research interests in the area of Constraint Satisfaction Problem (CSP) is to identify tractable classes of constraints and develop efficient solutions for them. In this paper, we introduce generalized staircase (GS)…
We generalise the results of Bhattacharya et al. (Journal of Computing Systems, 62(1):93-115, 2018) for the list-$k$-means problem defined as -- for a (unknown) partition $X_1, ..., X_k$ of the dataset $X \subseteq \mathbb{R}^d$, find a…
In this paper we present algorithms for several string problems in the Congested Clique model. In the Congested Clique model, $n$ nodes (computers) are used to solve some problem. The input to the problem is distributed among the nodes, and…
In this paper, we consider different constrained partition problems for weighted trees and cactus graphs. We focus on the (l,u)-partition problem, which is the problem of partitioning a weighted graph into connected clusters such that each…
What makes a computational problem easy (e.g., in P, that is, solvable in polynomial time) or hard (e.g., NP-hard)? This fundamental question now has a satisfactory answer for a quite broad class of computational problems, so called…