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With the proliferation of research means and computational methodologies, published biomedical literature is growing exponentially in numbers and volume. Cancer cell lines are frequently used models in biological and medical research that…

Computation and Language · Computer Science 2024-02-13 Ellery Smith , Rahel Paloots , Dimitris Giagkos , Michael Baudis , Kurt Stockinger

When extracting a relation of spans (intervals) from a text document, a common practice is to filter out tuples of the relation that are deemed dominated by others. The domination rule is defined as a partial order that varies along…

Databases · Computer Science 2024-03-05 Antoine Amarilli , Benny Kimelfeld , Sébastien Labbé , Stefan Mengel

Regular expressions with capture variables, also known as "regex formulas," extract relations of spans (interval positions) from text. These relations can be further manipulated via Relational Algebra as studied in the context of document…

Databases · Computer Science 2017-03-31 Dominik D. Freydenberger , Benny Kimelfeld , Liat Peterfreund

Information Extraction (IE) seeks to derive structured information from unstructured texts, often facing challenges in low-resource scenarios due to data scarcity and unseen classes. This paper presents a review of neural approaches to…

Computation and Language · Computer Science 2024-10-29 Shumin Deng , Yubo Ma , Ningyu Zhang , Yixin Cao , Bryan Hooi

Extractive summarization aims at selecting a set of indicative sentences from a source document as a summary that can express the major theme of the document. A general consensus on extractive summarization is that both relevance and…

Computation and Language · Computer Science 2016-01-21 Kuan-Yu Chen , Shih-Hung Liu , Berlin Chen , Hsin-Min Wang

We present a theoretical framework for the extraction and transformation of text documents. We propose to use a two-phase process where the first phase extracts span-tuples from a document, and the second phase maps the content of the…

Databases · Computer Science 2024-05-22 Cristian Riveros , Markus L. Schmid , Nicole Schweikardt

The project, under industrial funding, presented in this publication aims at the semantic analysis of a normative document describing requirements applicable to electrical appliances. The objective of the project is to build a semantic…

Information Retrieval · Computer Science 2021-12-28 Helene de Ribaupierre , Anne-Francoise Cutting-Decelle , Nathalie Baumier , Serge Blumental

This paper describes a machine learning and data science pipeline for structured information extraction from documents, implemented as a suite of open-source tools and extensions to existing tools. It centers around a methodology for…

We introduce an advanced information extraction pipeline to automatically process very large collections of unstructured textual data for the purpose of investigative journalism. The pipeline serves as a new input processor for the upcoming…

Computation and Language · Computer Science 2018-09-17 Gregor Wiedemann , Seid Muhie Yimam , Chris Biemann

While there has been substantial progress in factoid question-answering (QA), answering complex questions remains challenging, typically requiring both a large body of knowledge and inference techniques. Open Information Extraction (Open…

Artificial Intelligence · Computer Science 2017-04-20 Tushar Khot , Ashish Sabharwal , Peter Clark

Extracting information from documents usually relies on natural language processing methods working on one-dimensional sequences of text. In some cases, for example, for the extraction of key information from semi-structured documents, such…

Computation and Language · Computer Science 2021-06-29 Oliver Bensch , Mirela Popa , Constantin Spille

This work uses the state-of-the-art language model GPT-3 to offer a novel method of information extraction for knowledge base development. The suggested method attempts to solve the difficulties associated with obtaining relevant entities…

Computation and Language · Computer Science 2024-08-12 Ritabrata Roy Choudhury , Soumik Dey

We present a novel iterative extraction model, IterX, for extracting complex relations, or templates (i.e., N-tuples representing a mapping from named slots to spans of text) within a document. Documents may feature zero or more instances…

Computation and Language · Computer Science 2023-05-02 Yunmo Chen , William Gantt , Weiwei Gu , Tongfei Chen , Aaron Steven White , Benjamin Van Durme

Large language models (LLMs) are becoming useful in many domains due to their impressive abilities that arise from large training datasets and large model sizes. However, research on LLM-based approaches to document inconsistency detection…

Computation and Language · Computer Science 2026-04-09 Nelvin Tan , Yaowen Zhang , James Asikin Cheung , Fusheng Liu , Yu-Ching Shih , Dong Yang

The difficulties of automatic extraction of definitions and methods from scientific documents lie in two aspects: (1) the complexity and diversity of natural language texts, which requests an analysis method to support the discovery of…

Computation and Language · Computer Science 2023-07-06 Yutian Sun , Hai Zhuge

The vast amounts of on-line text now available have led to renewed interest in information extraction (IE) systems that analyze unrestricted text, producing a structured representation of selected information from the text. This paper…

Artificial Intelligence · Computer Science 2014-11-17 S. Soderland , Lehnert. W

Reading comprehension models answer questions posed in natural language when provided with a short passage of text. They present an opportunity to address a long-standing challenge in data management: the extraction of structured data from…

Information Retrieval · Computer Science 2024-08-20 Qiming Wang , Raul Castro Fernandez

Rule extraction is a central problem in interpretable machine learning because it seeks to convert opaque predictive behavior into human-readable symbolic structure. This paper presents Chat Incremental Pattern Constructor (ChatIPC), a…

Machine Learning · Computer Science 2026-05-05 Caleb Princewill Nwokocha

A typical information extraction pipeline consists of token- or span-level classification models coupled with a series of pre- and post-processing scripts. In a production pipeline, requirements often change, with classes being added and…

Artificial Intelligence · Computer Science 2022-01-19 Ramon Pires , Fábio C. de Souza , Guilherme Rosa , Roberto A. Lotufo , Rodrigo Nogueira

Business rules represent the knowledge that guides the operations of a business organization. They are implemented in software applications used by organizations, and the activity of extracting them from software is known as business rule…

Software Engineering · Computer Science 2015-03-27 Sohon Roy