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Multiple sequence alignment is a key process in today's biology, and finding a relevant alignment of several sequences is much more challenging than just optimizing some improbable evaluation functions. Our approach for addressing multiple…

Quantitative Methods · Quantitative Biology 2008-12-18 Frédéric Guinand , Yoann Pigné

We consider a new model of a branching random walk on a multidimensional lattice with continuous time and one source of particle reproduction and death, as well as an infinite number of sources in which, in addition to the walk, only…

Probability · Mathematics 2023-02-14 E. Filichkina , E. Yarovaya

The structure of a previously developed representation of the Leech lattice, $\Lambda_{24}$, is exposed to further light with this unified and very simple construction.

High Energy Physics - Theory · Physics 2007-05-23 Geoffrey Dixon

We consider two-layers of immiscible liquids confined between an upper and a lower rigid plate. The dynamics of the free liquid-liquid interface is described for arbitrary amplitudes by a single evolution equation derived from the basic…

Pattern Formation and Solitons · Physics 2007-05-23 D. Merkt , A. Pototsky , M. Bestehorn , U. Thiele

The electrostatics of 2D system with complicated inner boundary is studied. The object which we call "monster" is built by an iterative process of multiple conformal mapping of the circle exterior. The procedure leads to the figures built…

Disordered Systems and Neural Networks · Physics 2007-05-23 M. V. Entin , G. M. Entin

We perform a multifractal analysis of the evolution of London's street network from 1786 to 2010. First, we show that a single fractal dimension, commonly associated with the morphological description of cities, does not su ce to capture…

Physics and Society · Physics 2015-12-23 Roberto Murcio , A. Paolo Masucci , Elsa Arcaute , Michael Batty

Decomposing a deep neural network's learned representations into interpretable features could greatly enhance its safety and reliability. To better understand features, we adopt a geometric perspective, viewing them as a learned coordinate…

Machine Learning · Computer Science 2025-04-30 Aryeh Brill

We investigate the organization of traffic flow on preexisting uni- and bidirectional ant trails. Our investigations comprise a theoretical as well as an empirical part. We propose minimal models of uni- and bi-directional traffic flow…

In this report, we introduce the elephant random walk on the triangular lattice over $R^2$ incorporating directions by extending the model developed in \cite{baur2016elephant}. We study the behavior of the walk by finding the appropriate…

Probability · Mathematics 2026-03-17 Rohit Chaudhuri

We perform intensive computations of Generalised Langton's Ants, discovering rules with a big number of highways. We depict the structure of some of them, formally proving that the number of highways which are possible for a given rule does…

Discrete Mathematics · Computer Science 2025-11-19 Anahí Gajardo , Victor Lutfalla , Michaël Rao

A model for diffusion on a cubic lattice with a random distribution of traps is developed. The traps are redistributed at certain time intervals. Such models are useful for describing systems showing dynamic disorder, such as ion-conducting…

Condensed Matter · Physics 2009-10-31 S. Mandal , R. Dasgupta

We study a class of minimal geometric partial differential equations that serves as a framework to understand the evolution of boundaries between states in different pattern forming systems. The framework combines normal growth, curvature…

Analysis of PDEs · Mathematics 2023-11-06 James H. von Brecht , Scott G. McCalla , Eun Heui Kim

The division of labor (DOL) and task allocation among groups of ants living in a colony is thought to be highly efficient, and key to the robust survival of a colony. A great deal of experimental and theoretical work has been done toward…

Populations and Evolution · Quantitative Biology 2016-04-15 Jason M. Graham , Ivan L. Simpson-Kent , Marc A. Seid

We investigate a driven diffusive lattice gas model with two oppositely moving species of particles. The model is motivated by bi-directional traffic of ants on a pre-existing trail. A third species, corresponding to pheromones used by the…

Biological Physics · Physics 2009-11-11 Ambarish Kunwar , Debashish Chowdhury , Andreas Schadschneider , Katsuhiro Nishinari

Animal movement exhibits complex behavior which can be influenced by unobserved environmental conditions. We propose a model which allows for a spatially-varying movement rate and spatially-varying drift through a semiparametric potential…

Applications · Statistics 2017-02-28 James C. Russell , Ephraim M. Hanks , Murali Haran , David P. Hughes

We study the optical response of a 2D square lattice of atoms using classical electrodynamics. Due to dipole-dipole interactions, the lattice atoms polarize as if the lattice were an atom with up to three resonance frequencies, with…

Atomic Physics · Physics 2019-07-18 Juha Javanainen , Renuka Rajapakse

Generalising recent studies on the sawtooth lattice, a two-spin variant of the model is considered. Numerical studies of the energy spectra and the relevant spin correlations in the problem are presented. Perturbation theory analysis of the…

Strongly Correlated Electrons · Physics 2007-05-23 V. Ravi Chandra

A new method of derivation of Lorentz Transformation (LT) is given based on both axioms of special relativity (SR) and physical intuitions. The essence of the transformation is established and the crucial role played by the presumptions is…

General Physics · Physics 2015-06-16 Farid Shahandeh

A recently proposed stochastic cellular automaton model ({\it J. Phys. A 35, L573 (2002)}), motivated by the motions of ants in a trail, is investigated in detail in this paper. The flux of ants in this model is sensitive to the probability…

Statistical Mechanics · Physics 2016-08-31 Katsuhiro Nishinari , Debashish Chowdhury , Andreas Schadschneider

Many 2D lattice models of physical phenomena are conjectured to have conformally invariant scaling limits: percolation, Ising model, self-avoiding polymers, ... This has led to numerous exact (but non-rigorous) predictions of their scaling…

Mathematical Physics · Physics 2008-11-26 Stanislav Smirnov