Related papers: Cluster sizes in a classical Lennard-Jones chain
This article provides a convenient framework for quantitative evaluation of the entanglement generated when two structureless, distinguishable particles scatter non-relativistically in one dimension. It explores how three factors determine…
A two-dimensional statistical model of N charged particles interacting via logarithmic repulsion in the presence of an oppositely charged regular closed region K whose charge density is determined by its equilibrium potential at an inverse…
The isomorph theory provides an explanation for the so-called power law density scaling which has been observed in many molecular and polymeric glass formers, both experimentally and in simulations. Power law density scaling (relaxation…
In this paper we study the process of fragmentation of highly excited Lennard-Jones drops by introducing the concept of emitted fragments (clusters recognizable in configuration space which live more than a minimum lifetime). We focus on…
We consider long-range Bernoulli bond percolation on the $d$-dimensional hierarchical lattice in which each pair of points $x$ and $y$ are connected by an edge with probability $1-\exp(-\beta\|x-y\|^{-d-\alpha})$, where $0<\alpha<d$ is…
The heat capacity and isomer distributions of the 38 atom Lennard-Jones cluster have been calculated in the canonical ensemble using parallel tempering Monte Carlo methods. A distinct region of temperature is identified that corresponds to…
A set of analytical and computational tools based on transition path theory (TPT) is proposed to analyze flows in complex networks. Specifically, TPT is used to study the statistical properties of the reactive trajectories by which…
Dissipation in granular media leads to interesting phenomena as there are cluster formation and crystallization in non-equilibrium dynamical states. The freely cooling system is examined concerning the energy decay and the cluster evolution…
We present an analytical approach to determining the expected cascade size in a broad range of dynamical models on the class of random networks with arbitrary degree distribution and nonzero clustering introduced in [M.E.J. Newman, Phys.…
The problem of clustering a set of points moving on the line consists of the following: given positive integers n and k, the initial position and the velocity of n points, find an optimal k-clustering of the points. We consider two…
We use a cluster ensemble to determine the number of clusters, k, in a group of data. A consensus similarity matrix is formed from the ensemble using multiple algorithms and several values for k. A random walk is induced on the graph…
The problem of cluster formation and growth in first-order quark-hadron phase transition in heavy-ion collisions is considered. Behaving as Brownian particles, the clusters carry out random walks and can encounter one another, leading to…
In machine learning and data mining, Cluster analysis is one of the most widely used unsupervised learning technique. Philosophy of this algorithm is to find similar data items and group them together based on any distance function in…
Only recently the essential role of the percolation critical point has been considered on the dynamical properties of connected regions of aligned spins (domains) after a sudden temperature quench. In equilibrium, it is possible to resolve…
We propose a unifying, analytical theory accounting for the self-organization of colloidal systems in nano- or micro-cluster phases. We predict the distribution of cluter sizes with respect to interaction parameters and colloid…
We present a detailed study of the static and dynamic behavior of long semiflexible polymer chains in a melt. Starting from previously obtained fully equilibrated high molecular weight polymer melts [{\it Zhang et al.} ACS Macro Lett. 3,…
Recent very large molecular dynamics simulations of homogeneous nucleation with $(1-8) \cdot 10^9$ Lennard-Jones atoms [Diemand et al. J. Chem. Phys. {\bf 139}, 074309 (2013)] allow us to accurately determine the formation free energy of…
Bubble-nucleation processes of a Lennard-Jones liquid are studied by molecular dynamics simulations. Waiting time, which is the lifetime of a superheated liquid, is determined for several system sizes, and the apparent finite-size effect of…
A hierarchical scheme for clustering data is presented which applies to spaces with a high number of dimension ($N_{_{D}}>3$). The data set is first reduced to a smaller set of partitions (multi-dimensional bins). Multiple clustering…
The pair cluster (dimer) is studied within the framework of the extended Hubbard model and the grand canonical ensemble. The elastic interatomic interactions and thermal vibrational energy of the atoms are taken into account. The total…