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The exponential growth of biomedical texts such as biomedical literature and electronic health records (EHRs), poses a significant challenge for clinicians and researchers to access clinical information efficiently. To tackle this…

Computation and Language · Computer Science 2023-07-17 Qianqian Xie , Zheheng Luo , Benyou Wang , Sophia Ananiadou

Objective: The aim of this paper is to survey the recent work in medical documents summarization. Background: During the last decade, documents summarization got increasing attention by the AI research community. More recently it also…

Computation and Language · Computer Science 2007-05-23 Stergos D. Afantenos , Vangelis Karkaletsis , Panagiotis Stamatopoulos

Automatic evaluation metrics have been facilitating the rapid development of automatic summarization methods by providing instant and fair assessments of the quality of summaries. Most metrics have been developed for the general domain,…

Computation and Language · Computer Science 2023-03-21 Hongyi Yuan , Yaoyun Zhang , Fei Huang , Songfang Huang

Automatic Text Summarization (ATS), utilizing Natural Language Processing (NLP) algorithms, aims to create concise and accurate summaries, thereby significantly reducing the human effort required in processing large volumes of text. ATS has…

Artificial Intelligence · Computer Science 2025-11-03 Yang Zhang , Hanlei Jin , Dan Meng , Jun Wang , Jinghua Tan

Evidence-based medicine (EBM) is at the forefront of modern healthcare, emphasizing the use of the best available scientific evidence to guide clinical decisions. Due to the sheer volume and rapid growth of medical literature and the high…

Computation and Language · Computer Science 2025-05-29 Zihan Xu , Haotian Ma , Gongbo Zhang , Yihao Ding , Chunhua Weng , Yifan Peng

This chapter gives an overview of recent advances in the field of biomedical text summarization. Different types of challenges are introduced, and methods are discussed concerning the type of challenge that they address. Biomedical…

Computation and Language · Computer Science 2019-08-08 Milad Moradi , Nasser Ghadiri

Different from general documents, it is recognised that the ease with which people can understand a biomedical text is eminently varied, owing to the highly technical nature of biomedical documents and the variance of readers' domain…

Computation and Language · Computer Science 2023-05-02 Zheheng Luo , Qianqian Xie , Sophia Ananiadou

The substantial growth of textual content in diverse domains and platforms has led to a considerable need for Automatic Text Summarization (ATS) techniques that aid in the process of text analysis. The effectiveness of text summarization…

Computation and Language · Computer Science 2025-03-03 Nevidu Jayatilleke , Ruvan Weerasinghe , Nipuna Senanayake

Summaries are important when it comes to process huge amounts of information. Their most important benefit is saving time, which we do not have much nowadays. Therefore, a summary must be short, representative and readable. Generating…

Computation and Language · Computer Science 2019-04-02 Abdelkrime Aries , Djamel eddine Zegour , Walid Khaled Hidouci

Word embeddings have been shown adept at capturing the semantic and syntactic regularities of the natural language text, as a result of which these representations have found their utility in a wide variety of downstream content analysis…

Computation and Language · Computer Science 2021-03-02 Kishlay Jha

Large Language Models have advanced clinical Natural Language Generation, creating opportunities to manage the volume of medical text. However, the high-stakes nature of medicine requires reliable evaluation, which remains a challenge. In…

Health literacy has emerged as a crucial factor in making appropriate health decisions and ensuring treatment outcomes. However, medical jargon and the complex structure of professional language in this domain make health information…

Computation and Language · Computer Science 2022-01-11 Yue Guo , Wei Qiu , Yizhong Wang , Trevor Cohen

As part of the large number of scientific articles being published every year, the publication rate of biomedical literature has been increasing. Consequently, there has been considerable effort to harness and summarize the massive amount…

Computation and Language · Computer Science 2022-03-31 Amanuel Alambo , Tanvi Banerjee , Krishnaprasad Thirunarayan , Michael Raymer

Analyzing vast textual data and summarizing key information from electronic health records imposes a substantial burden on how clinicians allocate their time. Although large language models (LLMs) have shown promise in natural language…

Nowadays the medical domain is receiving more and more attention in applications involving Artificial Intelligence as clinicians decision-making is increasingly dependent on dealing with enormous amounts of unstructured textual data. In…

Computation and Language · Computer Science 2024-07-25 Anar Yeginbergen , Rodrigo Agerri

Abstracts derived from biomedical literature possess distinct domain-specific characteristics, including specialised writing styles and biomedical terminologies, which necessitate a deep understanding of the related literature. As a result,…

Computation and Language · Computer Science 2023-10-25 Chen Tang , Shun Wang , Tomas Goldsack , Chenghua Lin

The rapid advancement of large language models (LLMs) has opened new boundaries in the extraction and synthesis of medical knowledge, particularly within evidence synthesis. This paper reviews the state-of-the-art applications of LLMs in…

Evaluating multi-document summarization (MDS) quality is difficult. This is especially true in the case of MDS for biomedical literature reviews, where models must synthesize contradicting evidence reported across different documents. Prior…

Computation and Language · Computer Science 2023-05-24 Lucy Lu Wang , Yulia Otmakhova , Jay DeYoung , Thinh Hung Truong , Bailey E. Kuehl , Erin Bransom , Byron C. Wallace

Biomedical summarization requires large datasets to train for text generation. We show that while transfer learning offers a viable option for addressing this challenge, an in-domain pre-training does not always offer advantages in a BioASQ…

Computation and Language · Computer Science 2023-07-11 Dima Galat , Marian-Andrei Rizoiu

In the medical domain, identifying and expanding abbreviations in clinical texts is a vital task for both better human and machine understanding. It is a challenging task because many abbreviations are ambiguous especially for intensive…

Computation and Language · Computer Science 2018-06-11 Yue Liu , Tao Ge , Kusum S. Mathews , Heng Ji , Deborah L. McGuinness
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