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In this paper, we develop an in-memory analog computing (IMAC) architecture realizing both synaptic behavior and activation functions within non-volatile memory arrays. Spin-orbit torque magnetoresistive random-access memory (SOT-MRAM)…

Hardware Architecture · Computer Science 2021-09-15 Mohammed Elbtity , Abhishek Singh , Brendan Reidy , Xiaochen Guo , Ramtin Zand

This Article presents two optimized multi-GPU algorithms for Fock matrix construction, building on the work of Ufimtsev et al. and Barca et al. The novel algorithms, opt-UM and opt-Brc, introduce significant enhancements, including improved…

Computational Physics · Physics 2024-08-01 Elise Palethorpe , Ryan Stocks , Giuseppe M. J. Barca

Interest in many-core architectures applied to real time selections is growing in High Energy Physics (HEP) experiments. In this paper we describe performance measurements of many-core devices when applied to a typical HEP online task: the…

Instrumentation and Detectors · Physics 2014-11-25 A. Gianelle , S. Amerio , D. Bastieri , M. Corvo , W. Ketchum , T. Liu , A. Lonardo , D. Lucchesi , S. Poprocki , R. Rivera , L. Tosoratto , P. Vicini , P. Wittich

In this paper we present results of using parallel supercomputers to simulate beam dynamics in next-generation high intensity ion linacs. Our approach uses a three-dimensional space charge calculation with six types of boundary conditions.…

Accelerator Physics · Physics 2008-11-26 Robert D. Ryne , Ji Qiang

The rapid development in computing technology has paved the way for directive-based programming models towards a principal role in maintaining software portability of performance-critical applications. Efforts on such models involve a least…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-28 Kazuaki Matsumura , Simon Garcia De Gonzalo , Antonio J. Peña

As we rapidly approach the frontiers of ultra large computing resources, software optimization is becoming of paramount interest to scientific application developers interested in efficiently leveraging all available on-Node computing…

This study employed an artificial intelligence-enhanced molecular simulation framework to enable efficient Path Integral Molecular Dynamics (PIMD) simulations. Owing to its modular architecture and high-throughput capabilities, the…

Chemical Physics · Physics 2025-04-01 Cheng Fan , Maodong Li , Sihao Yuan , Zhaoxin Xie , Dechin Chen , Yi Isaac Yang , Yi Qin Gao

We have extended the Falkon lightweight task execution framework to make loosely coupled programming on petascale systems a practical and useful programming model. This work studies and measures the performance factors involved in applying…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-17 Ioan Raicu , Zhao Zhang , Mike Wilde , Ian Foster , Pete Beckman , Kamil Iskra , Ben Clifford

Molecular dynamics simulations are one of the methods in scientific computing that benefit from GPU acceleration. For those devices, SYCL is a promising API for writing portable codes. In this paper, we present the case study of "HAL's MD…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-07 Viktor Skoblin , Felix Höfling , Steffen Christgau

Molecular dynamics (MD) simulation is a powerful computational tool to study the behavior of macromolecular systems. But many simulations of this field are limited in spatial or temporal scale by the available computational resource. In…

Computational Physics · Physics 2010-01-22 Ji Xu , Ying Ren , Wei Ge , Xiang Yu , Xiaozhen Yang , Jinghai Li

Huge neural network models have shown unprecedented performance in real-world applications. However, due to memory constraints, model parallelism must be utilized to host large models that would otherwise not fit into the memory of a single…

Machine Learning · Computer Science 2021-04-13 Qifan Xu , Shenggui Li , Chaoyu Gong , Yang You

RRAM-based multi-core systems improve the energy efficiency and performance of CNNs. Thereby, the distributed parallel execution of convolutional layers causes critical data dependencies that limit the potential speedup. This paper presents…

Hardware Architecture · Computer Science 2023-10-27 Rebecca Pelke , Nils Bosbach , Jose Cubero , Felix Staudigl , Rainer Leupers , Jan Moritz Joseph

Asymmetric multicore processors (AMPs) couple high-performance big cores and low-power small cores with the same instruction-set architecture but different features, such as clock frequency or microarchitecture. Previous work has shown that…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-13 Juan Carlos Saez , Fernando Castro , Manuel Prieto-Matias

Realistic simulations in engineering or in the materials sciences can consume enormous computing resources and thus require the use of massively parallel supercomputers. The probability of a failure increases both with the runtime and with…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-30 Nils Kohl , Johannes Hötzer , Florian Schornbaum , Martin Bauer , Christian Godenschwager , Harald Köstler , Britta Nestler , Ulrich Rüde

This article reports on first results of the KONWIHR-II project OMI4papps at the Leibniz Supercomputing Centre (LRZ). The first part describes Apex-MAP, a tunable synthetic benchmark designed to simulate the performance of typical…

Performance · Computer Science 2010-02-01 Volker Weinberg , Matthias Brehm , Iris Christadler

We profile the impact of computation and inter-processor communication on the energy consumption and on the scaling of cortical simulations approaching the real-time regime on distributed computing platforms. Also, the speed and energy…

There are increasing number of works addressing the design challenges of fast, scalable solutions for the growing number of new type of applications. Recently, many of the solutions aimed at improving processing element capabilities to…

Hardware Architecture · Computer Science 2019-12-16 Somnath Mazumdar , Alberto Scionti

Modern scientific discovery increasingly relies on high-performance computing for complex modeling and simulation. A key challenge in improving parallel program performance is efficiently mapping tasks to processors and data to memory, a…

Machine Learning · Computer Science 2025-06-02 Anjiang Wei , Allen Nie , Thiago S. F. X. Teixeira , Rohan Yadav , Wonchan Lee , Ke Wang , Alex Aiken

We study the dynamics of parallel tempering simulations, also known as the replica exchange technique, which has become the method of choice for simulation of proteins and other complex systems. Recent results for the optimal choice of the…

Statistical Mechanics · Physics 2009-11-13 Walter Nadler , Ulrich H. E. Hansmann

In-memory computing (IMC) has been shown to be a promising approach for solving binary optimization problems while significantly reducing energy and latency. Building on the advantages of parallel computation, we propose an IMC-compatible…