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This work proposes stochastic partial differential equations (SPDEs) as a practical tool to replicate clustering effects of more detailed particle-based dynamics. Inspired by membrane-mediated receptor dynamics on cell surfaces, we…

Quantitative Methods · Quantitative Biology 2025-01-22 Nathalie Wehlitz , Mohsen Sadeghi , Alberto Montefusco , Christof Schütte , Grigorios A. Pavliotis , Stefanie Winkelmann

The cumulant correlators, $C_{pq}$, are statistical quantities that generalise the better-known $S_p$ parameters; the former are obtained from the two-point probability distribution function of the density fluctuations while the latter…

Astrophysics · Physics 2007-05-23 Dipak Munshi , Adrian L. Melott , Peter Coles

The Calculus of Wrapped Compartments (CWC) is a variant of the Calculus of Looping Sequences (CLS). While keeping the same expressiveness, CWC strongly simplifies the development of automatic tools for the analysis of biological systems.…

Computational Engineering, Finance, and Science · Computer Science 2010-06-29 Mario Coppo , Ferruccio Damiani , Maurizio Drocco , Elena Grassi , Angelo Troina

We conduct cluster analysis on a class of locally asymptotically self-similar stochastic processes, which includes multifractional Brownian motion as a representative. When the true number of clusters is supposed to be known, a new…

Machine Learning · Statistics 2020-01-15 Qidi Peng , Nan Rao , Ran Zhao

Scoring patent documents is very useful for technology management. However, conventional methods are based on static models and, thus, do not reflect the growth potential of the technology cluster of the patent. Because even if the cluster…

Sample-based quantum diagonalization (SQD) is a hybrid quantum-classical algorithm for estimating ground-state energies in electronic-structure calculations. It uses a quantum processor as a sampler to construct a variational subspace, with…

Quantum Physics · Physics 2026-04-21 Byeongyong Park , Sanha Kang , Jongseok Seo , Juhee Baek , Doyeol Ahn , Keunhong Jeong

A variant of coupled-cluster theory is described here, wherein the degrees of freedom are fluctuations of fragments between internally correlated states. The effects of intra-fragment correlation on the inter-fragment interaction are…

Chemical Physics · Physics 2019-05-24 Yuhong Liu , Anthony D. Dutoi

Spectral clustering is one of the most popular clustering methods. However, the high computational cost due to the involved eigen-decomposition procedure can immediately hinder its applications in large-scale tasks. In this paper we use…

Machine Learning · Computer Science 2023-01-24 Yongyu Wang

We introduce a simple definition of the weight of any given Slater determinant in the coupled-cluster state, namely as the expectation value of the projection operator onto that determinant. The definition can be applied to any…

Chemical Physics · Physics 2025-03-05 Håkon Emil Kristiansen , Håkon Kvernmoen , Simen Kvaal , Thomas Bondo Pedersen

Neural network-based clustering has recently gained popularity, and in particular a constrained clustering formulation has been proposed to perform transfer learning and image category discovery using deep learning. The core idea is to…

Computer Vision and Pattern Recognition · Computer Science 2018-06-29 Yen-Chang Hsu , Zhaoyang Lv , Joel Schlosser , Phillip Odom , Zsolt Kira

Bayesian model selection provides the cosmologist with an exacting tool to distinguish between competing models based purely on the data, via the Bayesian evidence. Previous methods to calculate this quantity either lacked general…

Astrophysics · Physics 2008-11-26 J. R. Shaw , M. Bridges , M. P. Hobson

Spectral clustering refers to a family of unsupervised learning algorithms that compute a spectral embedding of the original data based on the eigenvectors of a similarity graph. This non-linear transformation of the data is both the key of…

Machine Learning · Computer Science 2019-01-30 Nicolas Tremblay , Andreas Loukas

In cluster analysis, it can be useful to interpret the partition built from the data in the light of external categorical variables which were not directly involved to cluster the data. An approach is proposed in the model-based clustering…

A full coupled-cluster expansion suitable for sparse algebraic operations is developed by expanding the commutators of the Baker-Campbell-Hausdorff series explicitly for cluster operators in binary representations. A full coupled-cluster…

Chemical Physics · Physics 2018-09-13 Enhua Xu , Motoyuki Uejima , Seiichiro L. Ten-no

Ensemble clustering integrates a set of base clustering results to generate a stronger one. Existing methods usually rely on a co-association (CA) matrix that measures how many times two samples are grouped into the same cluster according…

Machine Learning · Computer Science 2023-02-24 Yuheng Jia , Sirui Tao , Ran Wang , Yongheng Wang

Subspace clustering refers to the problem of segmenting high dimensional data drawn from a union of subspaces into the respective subspaces. In some applications, partial side-information to indicate "must-link" or "cannot-link" in…

Computer Vision and Pattern Recognition · Computer Science 2018-05-23 Chun-Guang Li , Junjian Zhang , Jun Guo

We review some developments on clustering stochastic processes and come with the conclusion that asymptotically consistent clustering algorithms can be obtained when the processes are ergodic and the dissimilarity measure satisfies the…

Machine Learning · Statistics 2019-08-07 Qidi Peng , Nan Rao , Ran Zhao

We discover a theoretical connection between explanation estimation and distribution compression that significantly improves the approximation of feature attributions, importance, and effects. While the exact computation of various machine…

Machine Learning · Computer Science 2025-01-24 Hubert Baniecki , Giuseppe Casalicchio , Bernd Bischl , Przemyslaw Biecek

Constrained clustering has been well-studied for algorithms such as $K$-means and hierarchical clustering. However, how to satisfy many constraints in these algorithmic settings has been shown to be intractable. One alternative to encode…

Machine Learning · Computer Science 2012-09-24 Xiang Wang , Buyue Qian , Ian Davidson

This paper gives performance limits of the segmented compressive sampling (CS) which collects correlated samples. It is shown that the effect of correlation among samples for the segmented CS can be characterized by a penalty term in the…

Information Theory · Computer Science 2016-03-03 Hao Fang , Sergiy A. Vorobyov , Hai Jiang