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In this paper, we present a hybrid graph-drawing algorithm (GDA) for layouting large, naturally-clustered, disconnected graphs. We called it a hybrid algorithm because it is an implementation of a series of already known graph-drawing and…

Graphics · Computer Science 2015-07-13 Toni-Jan Keith P. Monserrat , Jaderick P. Pabico , Eliezer A. Albacea

Graph similarity search algorithms usually leverage the structural properties of a database. Hence, these algorithms are effective only on some structural variations of the data and are ineffective on other forms, which makes them hard to…

Databases · Computer Science 2021-04-01 Yodsawalai Chodpathumwan , Arash Termehchy , Stephen A. Ramsey , Aayam Shresta , Amy Glen , Zheng Liu

Recent advancements in large language models (LLMs) have shown impressive versatility across various tasks. To eliminate their hallucinations, retrieval-augmented generation (RAG) has emerged as a powerful approach, leveraging external…

Computation and Language · Computer Science 2025-05-30 Yuzheng Cai , Zhenyue Guo , Yiwen Pei , Wanrui Bian , Weiguo Zheng

Long-horizon applications increasingly require large language models (LLMs) to answer queries when relevant evidence is sparse and dispersed across very long contexts. Existing memory systems largely follow two paradigms: explicit…

Computation and Language · Computer Science 2026-01-08 Xin Zhang , Kailai Yang , Hao Li , Chenyue Li , Qiyu Wei , Sophia Ananiadou

Graph pattern matching algorithms to handle million-scale dynamic graphs are widely used in many applications such as social network analytics and suspicious transaction detections from financial networks. On the other hand, the computation…

Databases · Computer Science 2019-07-10 Hiroki Kanezashi , Toyotaro Suzumura , Dario Garcia-Gasulla , Min-hwan Oh , Satoshi Matsuoka

Graphs are a widely used paradigm for representing non-Euclidean data, with applications ranging from social network analysis to biomolecular prediction. While graph learning has achieved remarkable progress, real-world graph data presents…

Summarizing graphs w.r.t. structural features is important to reduce the graph's size and make tasks like indexing, querying, and visualization feasible. Our generic parallel BRS algorithm efficiently summarizes large graphs w.r.t. a custom…

Data Structures and Algorithms · Computer Science 2023-05-16 Jannik Rau , David Richerby , Ansgar Scherp

Subgraph GNNs are provably expressive neural architectures that learn graph representations from sets of subgraphs. Unfortunately, their applicability is hampered by the computational complexity associated with performing message passing on…

Machine Learning · Computer Science 2024-03-22 Beatrice Bevilacqua , Moshe Eliasof , Eli Meirom , Bruno Ribeiro , Haggai Maron

We develop a novel parallel decomposition strategy for unweighted, undirected graphs, based on growing disjoint connected clusters from batches of centers progressively selected from yet uncovered nodes. With respect to similar previous…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-02-09 Matteo Ceccarello , Andrea Pietracaprina , Geppino Pucci , Eli Upfal

In this paper, we investigate the problem of evaluating Basic Graph Patterns (BGP, for short, a subclass of SPARQL queries) over dynamic Linked Data graphs; i.e., Linked Data graphs that are continuously updated. We consider a setting where…

Databases · Computer Science 2025-05-19 Manolis Gergatsoulis , Matthew Damigos

This study develops a graph search algorithm to find the optimal discrimination path for the binary classification problem. The objective function is defined as the difference of variations between the true positive (TP) and false positive…

Machine Learning · Computer Science 2024-01-10 Qinwu Xu

With an exponentially growing number of graphs from disparate repositories, there is a strong need to analyze a graph database containing an extensive collection of small- or medium-sized data graphs (e.g., chemical compounds). Although…

Databases · Computer Science 2022-12-16 Kai Huang , Haibo Hu , Qingqing Ye , Kai Tian , Bolong Zheng , Xiaofang Zhou

In recent years, algorithms and neural architectures based on the Weisfeiler-Leman algorithm, a well-known heuristic for the graph isomorphism problem, emerged as a powerful tool for (supervised) machine learning with graphs and relational…

Machine Learning · Computer Science 2021-11-23 Christopher Morris , Matthias Fey , Nils M. Kriege

Many new database application domains such as experimental sciences and medicine are characterized by large sequences as their main form of data. Using approximate representation can significantly reduce the required storage and search…

Databases · Computer Science 2019-04-22 Hagit Shatkay , Stanley B. Zdonik

Locally-biased graph algorithms are algorithms that attempt to find local or small-scale structure in a large data graph. In some cases, this can be accomplished by adding some sort of locality constraint and calling a traditional graph…

Social and Information Networks · Computer Science 2016-12-06 Kimon Fountoulakis , David Gleich , Michael Mahoney

In the recent years, several polynomial algorithms of a dynamical nature have been proposed to address the graph isomorphism problem. In this paper we propose a generalization of an approach exposed in cond-mat/0209112 and find that this…

Computational Complexity · Computer Science 2007-05-23 Marats Golovkins

Vector data is prevalent across business and scientific applications, and its popularity is growing with the proliferation of learned embeddings. Vector data collections often reach billions of vectors with thousands of dimensions, thus,…

Information Retrieval · Computer Science 2025-09-09 Ilias Azizi , Karima Echihab , Themis Palpanas , Vassilis Christophides

Brain graph representation learning serves as the fundamental technique for brain diseases diagnosis. Great efforts from both the academic and industrial communities have been devoted to brain graph representation learning in recent years.…

Machine Learning · Computer Science 2022-06-28 Jiawei Zhang

The tree-depth problem can be seen as finding an elimination tree of minimum height for a given input graph $G$. We introduce a bicriteria generalization in which additionally the width of the elimination tree needs to be bounded by some…

Data Structures and Algorithms · Computer Science 2021-05-31 Piotr Borowiecki , Dariusz Dereniowski , Dorota Osula

Graph similarity search is among the most important graph-based applications, e.g. finding the chemical compounds that are most similar to a query compound. Graph similarity computation, such as Graph Edit Distance (GED) and Maximum Common…

Machine Learning · Computer Science 2020-03-03 Yunsheng Bai , Hao Ding , Song Bian , Ting Chen , Yizhou Sun , Wei Wang