English
Related papers

Related papers: Aztec: A Platform to Render Biomedical Software Fi…

200 papers

Neuroscience research has expanded dramatically over the past 30 years by advancing standardization and tool development to support rigor and transparency. Consequently, the complexity of the data pipeline has also increased, hindering…

Stanford Medicine is building a new data platform for our academic research community to do better clinical data science. Hospitals have a large amount of patient data and researchers have demonstrated the ability to reuse that data and AI…

The growing usage of research software in the research community has highlighted the need to recognize and acknowledge the contributions made not only by researchers but also by Research Software Engineers. However, the existing methods for…

Software Engineering · Computer Science 2024-06-05 Deekshitha , Siamak Farshidi , Jason Maassen , Rena Bakhshi , Rob van Nieuwpoort , Slinger Jansen

The proliferation of sensor technologies and advancements in data collection methods have enabled the accumulation of very large amounts of data. Increasingly, these datasets are considered for scientific research. However, the design of…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-28 Fatemeh Rouzbeh , Ananth Grama , Paul Griffin , Mohammad Adibuzzaman

Open Science, Reproducible Research, Findable, Accessible, Interoperable and Reusable (FAIR) data principles are long term goals for scientific dissemination. However, the implementation of these principles calls for a reinspection of our…

Digital Libraries · Computer Science 2021-03-11 Cristel Chandre , Jonathan Dubois

In a world of daily emerging scientific inquisition and discovery, the prolific launch of machine learning across industries comes to little surprise for those familiar with the potential of ML. Neither so should the congruent expansion of…

Artificial Intelligence · Computer Science 2021-12-13 Brianna Richardson , Juan E. Gilbert

Addressing the challenges posed by climate change, biodiversity loss, and environmental pollution requires comprehensive monitoring and effective data management strategies that are applicable across various scales in environmental system…

In today's world, we need to ensure that AI systems are fair and unbiased. Our study looked at tools designed to test the fairness of software to see if they are practical and easy for software developers to use. We found that while some…

Software Engineering · Computer Science 2024-09-05 Thanh Nguyen , Luiz Fernando de Lima , Maria Teresa Badassarre , Ronnie de Souza Santos

Software systems are increasingly making decisions on behalf of humans, raising concerns about the fairness of such decisions. Such concerns are usually attributed to flaws in algorithmic design or biased data, but we argue that they are…

Software Engineering · Computer Science 2021-04-09 Ali Farahani , Liliana Pasquale , Amel Bennaceur , Thomas Welsh , Bashar Nuseibeh

Researchers face a persistent barrier when applying computational algorithms with parameter configuration typically demanding programming skills, interfaces differing across environments, and settings rarely persisting between sessions.…

Medical image classification plays a crucial role in computer-aided clinical diagnosis. While deep learning techniques have significantly enhanced efficiency and reduced costs, the privacy-sensitive nature of medical imaging data…

Computer Vision and Pattern Recognition · Computer Science 2024-07-04 Sufen Ren , Yule Hu , Shengchao Chen , Guanjun Wang

The Virtual Research Environment is an analysis platform developed at CERN serving the needs of scientific communities involved in European Projects. Its scope is to facilitate the development of end-to-end physics workflows, providing…

The explosive growth of data fuels data-driven research, facilitating progress across diverse domains. The FAIR principles emerge as a guiding standard, aiming to enhance the findability, accessibility, interoperability, and reusability of…

Computation and Language · Computer Science 2024-08-12 Tingyan Ma , Wei Liu , Bin Lu , Xiaoying Gan , Yunqiang Zhu , Luoyi Fu , Chenghu Zhou

The goals of the Triple Aim of health care and the goals of P4 medicine outline objectives that require a significant health informatics component. However, the goals do not provide specifications about how all of the new individual patient…

Robot behavior is often validated through simulation-based testing, yet the replicability of such campaigns depends critically on transparent documentation of how tests are configured, executed, and post-processed. We argue that data…

Robotics · Computer Science 2026-05-29 Argentina Ortega , Samuel Wiest , Frederik Pasch , Nico Hochgeschwender

Publishing reproducible analyses is a long-standing and widespread challenge for the scientific community, funding bodies and publishers. Although a definitive solution is still elusive, the problem is recognized to affect all disciplines…

Computers and Society · Computer Science 2017-07-24 C. Furlanello , M. De Domenico , G. Jurman , N. Bussola

The ubiquity of computation in modern scientific research inflicts new challenges for reproducibility. While most journals now require code and data be made available, the standards for organization, annotation, and validation remain lax,…

Other Quantitative Biology · Quantitative Biology 2022-10-07 Griffin Chure

Although reproducibility is a core tenet of the scientific method, it remains challenging to reproduce many results. Surprisingly, this also holds true for computational results in domains such as systems biology where there have been…

Quantitative Methods · Quantitative Biology 2021-04-13 Michael L. Blinov , John H. Gennari , Jonathan R. Karr , Ion I. Moraru , David P. Nickerson , Herbert M. Sauro

In healthcare, the role of AI is continually evolving, and understanding the challenges its introduction poses on relationships between healthcare providers and patients will require a regulatory and behavioral approach that can provide a…

Computers and Society · Computer Science 2023-10-17 Chinasa T. Okolo , Michelle González Amador