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The automatic assignment of species information to the corresponding genes in a research article is a critically important step in the gene normalization task, whereby a gene mention is normalized and linked to a database record or…

Computation and Language · Computer Science 2022-10-17 Ling Luo , Chih-Hsuan Wei , Po-Ting Lai , Qingyu Chen , Rezarta Islamaj Doğan , Zhiyong Lu

Today's programmers, especially data science practitioners, make heavy use of data-processing libraries (APIs) such as PyTorch, Tensorflow, NumPy, Pandas, and the like. Program synthesizers can provide significant coding assistance to this…

Software Engineering · Computer Science 2022-05-19 Daye Nam , Baishakhi Ray , Seohyun Kim , Xianshan Qu , Satish Chandra

Text Categorization (TC), also known as Text Classification, is the task of automatically classifying a set of text documents into different categories from a predefined set. If a document belongs to exactly one of the categories, it is a…

Information Retrieval · Computer Science 2014-06-09 Vishwanath Bijalwan , Pinki Kumari , Jordan Pascual , Vijay Bhaskar Semwal

Searching, filtering and analysing scientific literature are time-consuming tasks when performing a systematic literature review. With the rise of artificial intelligence, some steps in the review process are progressively being automated.…

Artificial Intelligence · Computer Science 2025-09-30 José de la Torre-López , Aurora Ramírez , José Raúl Romero

Developers often wonder how to implement a certain functionality (e.g., how to parse XML files) using APIs. Obtaining an API usage sequence based on an API-related natural language query is very helpful in this regard. Given a query,…

Software Engineering · Computer Science 2017-07-17 Xiaodong Gu , Hongyu Zhang , Dongmei Zhang , Sunghun Kim

Background: Classifications in meta-research enable researchers to cope with an increasing body of scientific knowledge. They provide a framework for, e.g., distinguishing methods, reports, reproducibility, and evaluation in a knowledge…

Software Engineering · Computer Science 2022-09-22 Angelika Kaplan , Thomas Kühn , Ralf Reussner

The scientific research paradigm is undergoing a profound transformation owing to the development of Artificial Intelligence (AI). Recent works demonstrate that various AI-assisted research methods can largely improve research efficiency by…

Artificial Intelligence · Computer Science 2025-04-10 Jiakang Yuan , Xiangchao Yan , Shiyang Feng , Bo Zhang , Tao Chen , Botian Shi , Wanli Ouyang , Yu Qiao , Lei Bai , Bowen Zhou

Deep Neural Networks, and specifically fully-connected convolutional neural networks are achieving remarkable results across a wide variety of domains. They have been trained to achieve state-of-the-art performance when applied to problems…

Information Retrieval · Computer Science 2017-02-07 Zeeshan Khawar Malik , Mo Kobrosli , Peter Maas

Understanding large, structured documents like scholarly articles, requests for proposals or business reports is a complex and difficult task. It involves discovering a document's overall purpose and subject(s), understanding the function…

Computation and Language · Computer Science 2018-07-27 Muhammad Mahbubur Rahman , Tim Finin

Extracting information from unstructured text documents is a demanding task, since these documents can have a broad variety of different layouts and a non-trivial reading order, like it is the case for multi-column documents or nested…

Artificial Intelligence · Computer Science 2022-02-08 Matthias Engelbach , Dennis Klau , Jens Drawehn , Maximilien Kintz

An in-depth exploration of object detection and semantic segmentation is provided, combining theoretical foundations with practical applications. State-of-the-art advancements in machine learning and deep learning are reviewed, focusing on…

The task of text and sentence classification is associated with the need for large amounts of labelled training data. The acquisition of high volumes of labelled datasets can be expensive or unfeasible, especially for highly-specialised…

Computation and Language · Computer Science 2021-06-07 Aleksandra Edwards , David Rogers , Jose Camacho-Collados , Hélène de Ribaupierre , Alun Preece

To provide AI researchers with modern tools for dealing with the explosive growth of the research literature in their field, we introduce a new platform, AI Research Navigator, that combines classical keyword search with neural retrieval to…

Computation and Language · Computer Science 2020-11-03 Marzieh Fadaee , Olga Gureenkova , Fernando Rejon Barrera , Carsten Schnober , Wouter Weerkamp , Jakub Zavrel

We propose to model the text classification process as a sequential decision process. In this process, an agent learns to classify documents into topics while reading the document sentences sequentially and learns to stop as soon as enough…

Artificial Intelligence · Computer Science 2015-03-19 Gabriel Dulac-Arnold , Ludovic Denoyer , Patrick Gallinari

Deep learning has arguably achieved tremendous success in recent years. In simple words, deep learning uses the composition of many nonlinear functions to model the complex dependency between input features and labels. While neural networks…

Machine Learning · Statistics 2019-04-16 Jianqing Fan , Cong Ma , Yiqiao Zhong

Evaluation of students' performance for the completion of courses has been a major problem for both students and faculties during the work-from-home period in this COVID pandemic situation. To this end, this paper presents an in-depth…

Machine Learning · Computer Science 2020-09-08 Vipul Bansal , Himanshu Buckchash , Balasubramanian Raman

Semi-supervised learning through deep generative models and multi-lingual pretraining techniques have orchestrated tremendous success across different areas of NLP. Nonetheless, their development has happened in isolation, while the…

Computation and Language · Computer Science 2021-01-27 Yi Zhu , Ehsan Shareghi , Yingzhen Li , Roi Reichart , Anna Korhonen

This study examines how large language models categorize sentences from scientific papers using prompt engineering. We use two advanced web-based models, GPT-4o (by OpenAI) and DeepSeek R1, to classify sentences into predefined relationship…

Computation and Language · Computer Science 2025-03-05 Aniruddha Maiti , Samuel Adewumi , Temesgen Alemayehu Tikure , Zichun Wang , Niladri Sengupta , Anastasiia Sukhanova , Ananya Jana

In recent years, deep learning revolutionized machine learning and its applications, producing results comparable to human experts in several domains, including neuroscience. Each year, hundreds of scientific publications present…

Quantitative Methods · Quantitative Biology 2023-01-13 Louis Fabrice Tshimanga , Manfredo Atzori , Federico Del Pup , Maurizio Corbetta

This paper proposes a supervised classification algorithm capable of continual learning by utilizing an Adaptive Resonance Theory (ART)-based growing self-organizing clustering algorithm. The ART-based clustering algorithm is theoretically…

Machine Learning · Computer Science 2024-10-04 Naoki Masuyama , Yusuke Nojima , Farhan Dawood , Zongying Liu