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Parallel algorithms on CPU and GPU are implemented for the Unified Gas-Kinetic Scheme and their performances are investigated and compared by a two dimensional channel flow case. The parallel CPU algorithm has a one dimensional block…

Computational Physics · Physics 2018-11-02 Jizhou Liu , Fang Q. Hu , Xiaodong Li

Bloom filters are a fundamental data structure for approximate membership queries, with applications ranging from data analytics to databases and genomics. Several variants have been proposed to accommodate parallel architectures. GPUs,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-18 Daniel Jünger , Kevin Kristensen , Yunsong Wang , Xiangyao Yu , Bertil Schmidt

We present a framework for embedding graph structured data into a vector space, taking into account node features and topology of a graph into the optimal transport (OT) problem. Then we propose a novel distance between two graphs, named…

Machine Learning · Computer Science 2023-07-04 Dai Hai Nguyen , Koji Tsuda

Dense, volumetric maps are essential to enable robot navigation and interaction with the environment. To achieve low latency, dense maps are typically computed onboard the robot, often on computationally constrained hardware. Previous works…

Simulations of physical phenomena are essential to the expedient design of precision components in aerospace and other high-tech industries. These phenomena are often described by mathematical models involving partial differential equations…

Computational Physics · Physics 2017-01-05 Daniel Magee , Kyle E Niemeyer

Stencil computation is one of the most widely-used compute patterns in high performance computing applications. Spatial and temporal blocking have been proposed to overcome the memory-bound nature of this type of computation by moving…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-02-04 Kazuaki Matsumura , Hamid Reza Zohouri , Mohamed Wahib , Toshio Endo , Satoshi Matsuoka

We investigate the topological phases of the Haldane model on the Sierpi\'nski gasket. As a consequence of the fractal geometry, multiple fractal gaps arise. Additionally, a flat band appears, and due to a complex next-nearest neighbour…

Mesoscale and Nanoscale Physics · Physics 2025-02-04 Zebedeus Osseweijer , Lumen Eek , Anouar Moustaj , Mikael Fremling , Cristiane Morais Smith

This paper presents a Graphics Processing Units (GPUs) acceleration method of an iterative scheme for gas-kinetic model equations. Unlike the previous GPU parallelization of explicit kinetic schemes, this work features a fast converging…

Computational Physics · Physics 2020-01-08 Lianhua Zhu , Peng Wang , Songze Chen , Zhaoli Guo , Yonghao Zhang

Graph embedding is a recurrent problem in quantum computing, for instance, quantum annealers need to solve a minor graph embedding in order to map a given Quadratic Unconstrained Binary Optimization (QUBO) problem onto their internal…

Graph embedding techniques have attracted growing interest since they convert the graph data into continuous and low-dimensional space. Effective graph analytic provides users a deeper understanding of what is behind the data and thus can…

Machine Learning · Computer Science 2022-01-21 Azita Nouri , Philip E. Davis , Pradeep Subedi , Manish Parashar

General Purpose Graphics Processing Units (GPGPU) are used in most of the top systems in HPC. The total capacity of scratchpad memory has increased by more than 40 times in the last decade. However, existing optimizations for stencil…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-06-07 Lingqi Zhang , Mohamed Wahib , Peng Chen , Jintao Meng , Xiao Wang , Toshio Endo , Satoshi Matsuoka

Stencil computations are widely used in HPC applications. Today, many HPC platforms use GPUs as accelerators. As a result, understanding how to perform stencil computations fast on GPUs is important. While implementation strategies for…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-16 Ryuichi Sai , John Mellor-Crummey , Xiaozhu Meng , Mauricio Araya-Polo , Jie Meng

In this work, we propose FFDP, a set of IO-aware non-GEMM fused kernels supplemented with a distributed framework for image registration at unprecedented scales. Image registration is an inverse problem fundamental to biomedical and life…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Rohit Jena , Vedant Zope , Pratik Chaudhari , James C. Gee

Graphics Processing Units (GPUs) consisting of Streaming Multiprocessors (SMs) achieve high throughput by running a large number of threads and context switching among them to hide execution latencies. The number of thread blocks, and hence…

Hardware Architecture · Computer Science 2015-06-08 Vishwesh Jatala , Jayvant Anantpur , Amey Karkare

General-purpose multiprocessors (as, in our case, Intel IvyBridge and Intel Haswell) increasingly add GPU computing power to the former multicore architectures. When used for embedded applications (for us, Synthetic aperture radar) with…

Mathematical Software · Computer Science 2015-06-01 Mohamed Amine Bergach , Emilien Kofman , Robert de Simone , Serge Tissot , Michel Syska

Massive multi-threading in GPU imposes tremendous pressure on memory subsystems. Due to rapid growth in thread-level parallelism of GPU and slowly improved peak memory bandwidth, the memory becomes a bottleneck of GPU's performance and…

Hardware Architecture · Computer Science 2019-06-17 Bing Li , Mengjie Mao , Xiaoxiao Liu , Tao Liu , Zihao Liu , Wujie Wen , Yiran Chen , Hai , Li

In [Choi08], we introduced the notion of minor-embedding in adiabatic quantum optimization. A minor-embedding of a graph G in a quantum hardware graph U is a subgraph of U such that G can be obtained from it by contracting edges. In this…

Quantum Physics · Physics 2011-06-01 Vicky Choi

Recent studies have experimentally shown that we can achieve in non-Euclidean metric space effective and efficient graph embedding, which aims to obtain the vertices' representations reflecting the graph's structure in the metric space.…

Machine Learning · Statistics 2023-05-16 Atsushi Suzuki , Atsushi Nitanda , Taiji Suzuki , Jing Wang , Feng Tian , Kenji Yamanishi

Handling clustering problems are important in data statistics, pattern recognition and image processing. The mean-shift algorithm, a common unsupervised algorithms, is widely used to solve clustering problems. However, the mean-shift…

Computer Vision and Pattern Recognition · Computer Science 2021-12-30 Le You , Han Jiang , Jinyong Hu , Chorng Chang , Lingxi Chen , Xintong Cui , Mengyang Zhao

We present an efficient algorithm for a problem in the interface between clustering and graph embeddings. An embedding $\varphi:G\rightarrow M$ of a graph $G$ into a 2-manifold $M$ maps the vertices in $V(G)$ to distinct points and the…

Computational Geometry · Computer Science 2019-07-24 Hugo A. Akitaya , Radoslav Fulek , Csaba D. Tóth