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Tomography has made a revolutionary impact on diverse fields, ranging from macro-/mesoscopic scale studies in biology, radiology, plasma physics to the characterization of 3D atomic structure in material science. The fundamental of…

Optimization and Control · Mathematics 2020-04-28 Minh Pham , Yakun Yuan , Arjun Rana , Jianwei Miao , Stanley Osher

A major challenge in single particle reconstruction methods using cryo-electron microscopy is to attain a resolution sufficient to interpret fine details in three-dimensional (3D) macromolecular structures. Obtaining high resolution 3D…

Numerical Analysis · Mathematics 2013-07-23 Lanhui Wang , Yoel Shkolnisky , Amit Singer

Tomography has had an important impact on the physical, biological, and medical sciences. To date, most tomographic applications have been focused on 3D scalar reconstructions. However, in some crucial applications, vector tomography is…

Medical Physics · Physics 2023-10-20 Minh Pham , Xingyuan Lu , Arjun Rana , Stanley Osher , Jianwei Miao

Electron tomography is becoming an increasingly important tool in materials science for studying the three-dimensional morphologies and chemical compositions of nanostructures. The image quality obtained by many current algorithms is…

For nonlinear multispectral computed tomography (CT), accurate and fast image reconstruction is challenging when the scanning geometries under different X-ray energy spectra are inconsistent or mismatched. Motivated by this, we propose an…

Numerical Analysis · Mathematics 2025-07-28 Yu Gao , Chong Chen

Computed Tomography (CT) has been widely adopted in medicine and it is increasingly being used in scientific and industrial applications. Parallelly, research in different mathematical areas concerning discrete inverse problems has led to…

For reconstructing large tomographic datasets fast, filtered backprojection-type or Fourier-based algorithms are still the method of choice, as they have been for decades. These robust and computationally efficient algorithms have been…

Numerical Analysis · Mathematics 2021-08-31 Poulami Somanya Ganguly , Daniël M. Pelt , Doga Gürsoy , Francesco de Carlo , K. Joost Batenburg

We propose a federated algorithm for reconstructing images using multimodal tomographic data sourced from dispersed locations, addressing the challenges of traditional unimodal approaches that are prone to noise and reduced image quality.…

Optimization and Control · Mathematics 2025-01-13 Geunyeong Byeon , Minseok Ryu , Zichao Wendy Di , Kibaek Kim

Tomographic image sizes keep increasing over time and while the GPUs that compute the tomographic reconstruction are also increasing in memory size, they are not doing so fast enough to reconstruct the largest datasets. This problem is…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-10 Ander Biguri , Reuben Lindroos , Robert Bryll , Hossein Towsyfyan , Hans Deyhle , Richard Boardman , Mark Mavrogordato , Manjit Dosanjh , Steven Hancock , Thomas Blumensath

Computed tomography (CT) provides high spatial resolution visualization of 3D structures for scientific and clinical applications. Traditional analytical/iterative CT reconstruction algorithms require hundreds of angular data samplings, a…

Image and Video Processing · Electrical Eng. & Systems 2024-11-14 Di Xu , Yang Yang , Hengjie Liu , Qihui Lyu , Martina Descovich , Dan Ruan , Ke Sheng

X-Ray based computed tomography (CT) is a well-established technique for determining the three-dimensional structure of an object from its two-dimensional projections. In the past few decades, there have been significant advancements in the…

Medical Physics · Physics 2023-04-26 Dinesh Kumar , Dilworth Y. Parkinson , Jeffrey J. Donatelli

A unified method for three-dimensional reconstruction of objects from transmission images collected at multiple illumination directions is described. The method may be applicable to experimental conditions relevant to absorption-based,…

Medical Physics · Physics 2022-12-07 Timur E. Gureyev , Hamish G. Brown , Harry M. Quiney , Leslie J. Allen

Model-based learned iterative reconstruction methods have recently been shown to outperform classical reconstruction algorithms. Applicability of these methods to large scale inverse problems is however limited by the available memory for…

Image and Video Processing · Electrical Eng. & Systems 2020-04-21 Andreas Hauptmann , Jonas Adler , Simon Arridge , Ozan Öktem

In this work, we propose a new paradigm of iterative model-based reconstruction algorithms for providing real-time solution for zooming-in and refining a region of interest in medical and clinical tomographic images. This algorithmic…

Image and Video Processing · Electrical Eng. & Systems 2025-12-01 Junqi Tang , Guixian Xu , Jinglai Li

Deep learning affords enormous opportunities to augment the armamentarium of biomedical imaging, albeit its design and implementation have potential flaws. Fundamentally, most deep learning models are driven entirely by data without…

Computer Vision and Pattern Recognition · Computer Science 2021-05-26 Liyue Shen , Wei Zhao , Dante Capaldi , John Pauly , Lei Xing

From a single image, humans are able to perceive the full 3D shape of an object by exploiting learned shape priors from everyday life. Contemporary single-image 3D reconstruction algorithms aim to solve this task in a similar fashion, but…

Computer Vision and Pattern Recognition · Computer Science 2018-12-31 Xiuming Zhang , Zhoutong Zhang , Chengkai Zhang , Joshua B. Tenenbaum , William T. Freeman , Jiajun Wu

In application of tomography imaging, limited-angle problem is a quite practical and important issue. In this paper, an iterative reprojection-reconstruction (IRR) algorithm using a modified Papoulis-Gerchberg (PG) iterative scheme is…

Computer Vision and Pattern Recognition · Computer Science 2019-05-01 Yuli Sun , Jinxu Tao , Conggui Liu

In dynamic tomography the object undergoes changes while projections are being acquired sequentially in time. The resulting inconsistent set of projections cannot be used directly to reconstruct an object corresponding to a time instant.…

Image and Video Processing · Electrical Eng. & Systems 2024-01-30 Berk Iskender , Marc L. Klasky , Yoram Bresler

Neural 3D implicit representations learn priors that are useful for diverse applications, such as single- or multiple-view 3D reconstruction. A major downside of existing approaches while rendering an image is that they require evaluating…

Computer Vision and Pattern Recognition · Computer Science 2023-12-20 Tarun Yenamandra , Ayush Tewari , Nan Yang , Florian Bernard , Christian Theobalt , Daniel Cremers

This paper concerns diffraction-tomographic reconstruction of an object characterized by its scattering potential. We establish a rigorous generalization of the Fourier diffraction theorem in arbitrary dimension, giving a precise relation…

Numerical Analysis · Mathematics 2026-03-30 Clemens Kirisits , Michael Quellmalz , Eric Setterqvist
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