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Reverse engineering of complex dynamical networks is important for a variety of fields where uncovering the full topology of unknown networks and estimating parameters characterizing the network structure and dynamical processes are of…

Data Analysis, Statistics and Probability · Physics 2012-12-19 Wen-Xu Wang , Jie Ren , Ying-Cheng Lai , Baowen Li

We model acoustic dynamics in space and time from synthetic sensor data. The tasks are (i) to predict and extrapolate the spatiotemporal dynamics, and (ii) reconstruct the acoustic state from partial observations. To achieve this, we…

Fluid Dynamics · Physics 2024-11-12 Defne Ege Ozan , Luca Magri

This work proposes an iterative sparse-regularized regression method to recover governing equations of nonlinear dynamical systems from noisy state measurements. The method is inspired by the Sparse Identification of Nonlinear Dynamics…

Machine Learning · Statistics 2021-02-24 Alexandre Cortiella , Kwang-Chun Park , Alireza Doostan

The identification of nonlinear dynamics from observations is essential for the alignment of the theoretical ideas and experimental data. The last, in turn, is often corrupted by the side effects and noise of different natures, so…

Machine Learning · Computer Science 2020-06-08 Anna Shalova , Ivan Oseledets

The development of nonlinear optimization algorithms capable of performing reliably in the presence of noise has garnered considerable attention lately. This paper advocates for strategies to create noise-tolerant nonlinear optimization…

Optimization and Control · Mathematics 2024-10-04 Yuchen Lou , Shigeng Sun , Jorge Nocedal

We analyze the landscape and training dynamics of diagonal linear networks in a linear regression task, with the network parameters being perturbed by small isotropic normal noise. The addition of such noise may be interpreted as a…

Machine Learning · Computer Science 2025-03-18 Gabriel Clara , Sophie Langer , Johannes Schmidt-Hieber

Recent years have seen a lot of progress in algorithms for learning parameters of spreading dynamics from both full and partial data. Some of the remaining challenges include model selection under the scenarios of unknown network structure,…

Social and Information Networks · Computer Science 2024-01-02 Mateusz Wilinski , Andrey Y. Lokhov

It has been recognized that many complex dynamical systems in the real world require a description in terms of multiplex networks, where a set of common, mutually connected nodes belong to distinct network layers and play a different role…

Physics and Society · Physics 2019-12-23 Chuang Ma , Han-Shuang Chen , Xiang Li , Ying-Cheng Lai , Hai-Feng Zhang

We apply a Gaussian variational approximation to model reduction in large biochemical networks of unary and binary reactions. We focus on a small subset of variables (subnetwork) of interest, e.g. because they are accessible experimentally,…

Chemical Physics · Physics 2017-08-02 Barbara Bravi , Peter Sollich

A method of network reconstruction from the dynamical time series is introduced, relying on the concept of derivative-variable correlation. Using a tunable observable as a parameter, the reconstruction of any network with known interaction…

Data Analysis, Statistics and Probability · Physics 2013-10-29 Zoran Levnajić , Arkady Pikovsky

We develop methods to efficiently reconstruct the topology and line parameters of a power grid from the measurement of nodal variables. We propose two compressed sensing algorithms that minimize the amount of necessary measurement resources…

Systems and Control · Computer Science 2019-07-10 Farnaz Basiri , Jose Casadiego , Marc Timme , Dirk Witthaut

Nonlinear stochastic differential equations provide one of the mathematical models yielding 1/f noise. However, the drawback of a single equation as a source of 1/f noise is the necessity of power-law steady-state probability density of the…

Statistical Mechanics · Physics 2016-05-25 J. Ruseckas , R Kazakevičius , B Kaulakys

This work proposes a general framework for capturing noise-driven transitions in spatially extended non-equilibrium systems and explains the emergence of coherent patterns beyond the instability onset. The framework relies on stochastic…

Dynamical Systems · Mathematics 2024-12-16 Mickaël D. Chekroun , Honghu Liu , James C. McWilliams

A central challenge in neuroscience is understanding how neural system implements computation through its dynamics. We propose a nonlinear time series model aimed at characterizing interpretable dynamics from neural trajectories. Our model…

Quantitative Methods · Quantitative Biology 2016-10-28 Yuan Zhao , Il Memming Park

We consider a wireless sensor network, sampling a bandlimited field, described by a limited number of harmonics. Sensor nodes are irregularly deployed over the area of interest or subject to random motion; in addition sensors measurements…

Other Computer Science · Computer Science 2009-11-13 A. Nordio , C. -F. Chiasserini , E. Viterbo

Multidimensional scaling is an important dimension reduction tool in statistics and machine learning. Yet few theoretical results characterizing its statistical performance exist, not to mention any in high dimensions. By considering a…

Methodology · Statistics 2022-03-30 Xiucai Ding , Qiang Sun

We use particle dynamics simulations to probe the correlations between noise and dynamics in a variety of disordered systems, including superconducting vortices, 2D electron liquid crystals, colloids, domain walls, and granular media. The…

Superconductivity · Physics 2009-11-10 C. J. Olson Reichhardt , C. Reichhardt

Linear Response theory aims to predict how added forcing alters the statistical properties of an unforced system. These kinds of questions have been studied predominantly for autonomous dynamical systems, yet many systems in the physical,…

Dynamical Systems · Mathematics 2026-04-07 Stefano Galatolo , Valerio Lucarini

Many consequential real-world systems, like wind fields and ocean currents, are dynamic and hard to model. Learning their governing dynamics remains a central challenge in scientific machine learning. Dynamic Mode Decomposition (DMD)…

Machine Learning · Computer Science 2025-11-26 Yujin Kim , Sarah Dean

We develop a framework to track the structure of temporal networks with a signal processing approach. The method is based on the duality between networks and signals using a multidimensional scaling technique. This enables a study of the…

Social and Information Networks · Computer Science 2015-05-13 Ronan Hamon , Pierre Borgnat , Patrick Flandrin , Céline Robardet