English
Related papers

Related papers: Biopolymer dynamics driven by helical flagella

200 papers

Cilia and flagella are essential building blocks for biological fluid transport and locomotion at the micron scale. They often beat in synchrony and may transition between different synchronization modes in the same cell type. Here, we…

Fluid Dynamics · Physics 2018-02-14 Hanliang Guo , Lisa Fauci , Michael Shelley , Eva Kanso

Locomotion and transport of microorganisms in fluids is an essential aspect of life. Search for food, orientation toward light, spreading of off-spring, and the formation of colonies are only possible due to locomotion. Swimming at the…

Biological Physics · Physics 2015-05-26 Jens Elgeti , Roland G. Winkler , Gerhard Gompper

We analyze experimentally the shape of a long elastic filament rotating in a viscous liquid. We identify a continuous but sharp transition from a straight to an helical shape, resulting from the competition between viscous stresses and…

Fluid Dynamics · Physics 2009-11-13 Naïs Coq , Olivia Du Roure , Joel Marthelot , Denis Bartolo , Marc Fermigier

It is known from the wave-like motion of microtubules in motility assays that the piconewton forces that motors produce can be sufficient to bend the filaments. In cellular phenomena such as cytosplasmic streaming, molecular motors…

Soft Condensed Matter · Physics 2017-07-11 Gabriele De Canio , Eric Lauga , Raymond E. Goldstein

Active deformable filaments exhibit a large range of qualitatively different three-dimensional dynamics, depending on their flexibility, the strength and nature of the active forcing, and the surrounding environment. We investigate the…

We describe a new kind of self-propelling motion of bacteria based on the cooperative action of rotating flagella on the surface of bacteria. Describing the ensemble of rotating flagella in the framework of the hydrodynamics with spin the…

Soft Condensed Matter · Physics 2016-06-15 Mihails Belovs , Andrejs Cebers

The swimming properties of an E. coli-type model bacterium are investigated by mesoscale hy- drodynamic simulations, combining molecular dynamics simulations of the bacterium with the multiparticle particle collision dynamics method for the…

Soft Condensed Matter · Physics 2016-08-23 Jinglei Hu , Mingcheng Yang , Gerhard Gompper , Roland G. Winkler

Exact results for three trajectories of small numbers of particles interacting hydrodynamically through Stokeslets are presented. First, the middle particle in a vertical trio of particles sediments at a constant velocity for all time.…

Fluid Dynamics · Physics 2025-04-01 Benjamin J. Landrum

We present experimental confirmation of dynamic facilitation in monodisperse and bidisperse colloidal suspensions near the glass transition volume fraction. Correlations in particle dynamics are seen to exist not only in space (clusters and…

Soft Condensed Matter · Physics 2014-06-24 Scott V. Franklin , Eric R. Weeks

Direct near field electrospinning is used to produce very long helical polystyrene microfibers in water. The pitch length of helices can be controlled by changing the applied voltage, allowing to produce both micro springs and…

Soft Condensed Matter · Physics 2011-09-13 S. P. Shariatpanahi , A. Iraji zad , I. Abdollahzadeh , R. Shirsavar , D. Bonn , R. Ejtehadi

We study the over-damped dynamics of individual one-dimensional elastic filaments subjected to a chiral active force which propels each point of the filament at a fixed angle relative to the tangent vector of the filament at that point.…

Soft Condensed Matter · Physics 2026-03-09 Chanania Steinbock , Daniel A. Beller

Many microorganisms propel through complex media by deformations of their flagella. The beat is thought to emerge from interactions between forces of the surrounding fluid, passive elastic response from deformations of the flagellum, and…

Fluid Dynamics · Physics 2024-01-23 Kathryn G. Link , Robert D. Guy , Becca Thomases , Paulo E. Arratia

In their search for metabolic resources microbes swim through viscous environments that present physical anisotropies, including steric obstacles across a wide range of sizes. Hydrodynamic forces are known to significantly alter swimmer…

Soft Condensed Matter · Physics 2020-07-03 Kentaro Hoeger , Tristan Ursell

The conformational and dynamical properties of active polymers in solution are determined by the nature of the activity, and the behavior of polymers with self-propelled, active Brownian particle-type monomers differs qualitatively from…

Soft Condensed Matter · Physics 2020-05-27 Aitor Martin-Gomez , Thomas Eisenstecken , Gerhard Gompper , Roland G. Winkler

Via large-scale molecular dynamics simulations, we observe the melting of a topological glass of stiff ring polymers by incorporating flexible ring polymers, along an isobaric path. As more flexible ring polymers are introduced, cluster…

Soft Condensed Matter · Physics 2023-05-19 Projesh Kumar Roy , Pinaki Chaudhuri , Satyavani Vemparala

We present a mathematical model of lophotrichous bacteria, motivated by Pseudomonas putida, which swim through fluid by rotating a cluster of multiple flagella extended from near one pole of the cell body. Although the flagella rotate…

Quantitative Methods · Quantitative Biology 2024-08-26 Jeungeun Park , Yongsam Kim , Wanho Lee , Veronika Pfeifer , Valeriia Muraveva , Carsten Beta , Sookkyung Lim

Worm-like filaments that are propelled homogeneously along their tangent vector are studied by Brownian dynamics simulations. Systems in two dimensions are investigated, corresponding to filaments adsorbed to interfaces or surfaces. A large…

Soft Condensed Matter · Physics 2016-08-23 Rolf E. Isele-Holder , Jens Elgeti , Gerhard Gompper

We describe the effect of hydrodynamic interactions in the sedimentation of a pair of inextensible semiflexible filaments under a uniform constant force at low Reynolds numbers. We have analyzed the different regimes and the morphology of…

Soft Condensed Matter · Physics 2009-11-13 Isaac Llopis , Ignacio Pagonabarraga , Marco Cosentino Lagomarsino , Christopher P. Lowe

Cilia and flagella are self-actuated microtubule-based structures that are present on many cell surfaces, ranging from the outer surface of single-cell organisms to the internal epithelial surfaces in larger animals. A fast and robust…

Fluid Dynamics · Physics 2020-04-08 Hanliang Guo , Hai Zhu , Shravan Veerapaneni

We use a three-bead-spring model to investigate the dynamics of bi-flagellate micro-swimmers near a surface. While the primary dynamics and scattering are governed by geometric-dependent direct contact, the fluid flows generated by the…

Biological Physics · Physics 2017-08-17 Enkeleida Lushi , Vasily Kantsler , Raymond E. Goldstein