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Bacteria in biofilms form complex structures and can collectively migrate within mobile aggregates, which is referred to as swarming. This behavior is influenced by a combination of various factors, including morphological characteristics…

Soft Condensed Matter · Physics 2024-01-19 Bohan Wu-Zhang , Dmitry A. Fedosov , Gerhard Gompper

We investigate the hydrodynamic interaction between two elastic swimmers which are composed of three spheres and two harmonic springs. In this model, the natural length of each spring is assumed to undergo a prescribed cyclic change,…

Soft Condensed Matter · Physics 2019-05-22 Mizuki Kuroda , Kento Yasuda , Shigeyuki Komura

In this article we develop a theoretical framework to study the hydrodynamic interactions in the presence of a non-flat and no-slip boundary. We calculate the influence of a small amplitude and sinusoidal deformations of a boundary wall in…

Soft Condensed Matter · Physics 2015-05-20 Somaye Hosseini Rad , Ali najafi

Self-propelled micron-size particles suspended in a fluid, like bacteria or synthetic microswimmers, are strongly non-equilibrium systems where particle motility breaks the microscopic detailed balance, often resulting in large-scale…

Soft Condensed Matter · Physics 2024-03-15 Dóra Bárdfalvy , Viktor Škultéty , Cesare Nardini , Alexander Morozov , Joakim Stenhammar

Microorganisms ofter move in confined, disordered environments, where hydrodynamic couplings can modify their transport behavior. Using extensive finite-element simulations, we investigate the dynamics of microswimmers -- modeled as…

Soft Condensed Matter · Physics 2026-03-24 Mirko Residori , Sebastian Aland , Christina Kurzthaler

This paper describes the results of our theoretical and numerical studies of hydrodynamic interactions in a suspension of spherical particles confined between two parallel planar walls, under creeping-flow conditions. We propose a novel…

Soft Condensed Matter · Physics 2009-11-11 S. Bhattacharya , J. Blawzdziewicz , E. Wajnryb

We propose a minimal model of microswimmer based on immersed boundary methods. We describe a swimmer (either pusher or puller) as a distribution of point forces, representing the swimmer's flagellum and body, with only the latter subjected…

Computational Physics · Physics 2024-07-12 Francesco Michele Ventrella , Guido Boffetta , Massimo Cencini , Filippo De Lillo

Motile bacteria play essential roles in biology that rely on their dynamic behaviors, including their ability to navigate, interact, and self-organize. However, bacteria dynamics on fluid interfaces are not well understood. Swimmers…

Biological Physics · Physics 2023-05-02 Jiayi Deng , Mehdi Molaei , Nicholas G. Chisholm , Kathleen J. Stebe

The goal of the paper is to determine boundary conditions in PDE models of collisions of microswimmers in a viscous fluid. We consider two self-propelled spheres (microswimmers) moving towards each other in viscous fluid. We first show that…

Analysis of PDEs · Mathematics 2012-12-27 Leonid Berlyand , Vitaliy Gyrya , Mykhailo Potomkin

The ciliary locomotion and feeding of an axisymmetric micro-swimmer in a complex fluid whose viscosity depends on nutrient concentration are investigated numerically. The micro-swimmer is modeled as having spheroidal geometry, and ciliary…

Fluid Dynamics · Physics 2020-07-01 Patrick S. Eastham , Kourosh Shoele

Cells swimming in confined environments are attracted by surfaces. We measure the steady-state distribution of smooth-swimming bacteria (Escherichia coli) between two glass plates. In agreement with earlier studies, we find a strong…

Soft Condensed Matter · Physics 2008-10-02 Allison P. Berke , Linda Turner , Howard C. Berg , Eric Lauga

We propose minimal models of one-, two- and three-dimensional micro-swimmers at low Reynolds number with a periodic non-reciprocal motion. These swimmers are either "pushers" or "pullers" of fluid along the swimming axis, or combination of…

Soft Condensed Matter · Physics 2010-04-30 Nobuhiko Watari , Ronald G. Larson

We present a two dimensional model of hydrodynamic interaction between a circular swimmer and a circular post at low Reynolds number, using a point singularity description of the swimming activity. We derive a nonlinear dynamical system…

Fluid Dynamics · Physics 2016-12-09 Dario Papavassiliou , Gareth P Alexander

We use a three-bead-spring model to investigate the dynamics of bi-flagellate micro-swimmers near a surface. While the primary dynamics and scattering are governed by geometric-dependent direct contact, the fluid flows generated by the…

Biological Physics · Physics 2017-08-17 Enkeleida Lushi , Vasily Kantsler , Raymond E. Goldstein

We derive from first principles a three-dimensional theory of self-propelled particle swarming in a viscous fluid environment. Our model predicts emergent collective behavior that depends critically on fluid opacity, mechanism of…

Soft Condensed Matter · Physics 2026-05-12 Yao-Li Chuang , M. R. D'Orsogna , T. Chou

We use numerical simulations to probe the dynamics of concentrated suspensions of spherical microswimmers interacting hydrodynamically. Previous work in the dilute limit predicted orientational instabilities of aligned suspensions for both…

Soft Condensed Matter · Physics 2013-02-12 Arthur A. Evans , Takuji Ishikawa , Takami Yamaguchi , Eric Lauga

Many microswimmers are able to swim through viscous fluids by employing periodic non-reciprocal deformations of their appendages. Here we use a simple microswimmer model inspired by swimming biflagellates which consists of a spherical cell…

Soft Condensed Matter · Physics 2025-08-22 Sridhar Bulusu , Andreas Zöttl

Microswimmers (planktonic microorganisms or artificial active particles) immersed in a fluid interact with the ambient flow, altering their trajectories. In surface gravity waves, a common goal for microswimmers is vertical migration (e.g.,…

Soft Condensed Matter · Physics 2022-03-01 Kunlin Ma , Nimish Pujara , Jean-Luc Thiffeault

Bacteria exist in a free-swimming state or in a sessile biofilm state. The transition from free-swimming to sessile mode is characterized by changes in gene expression which alter, among others,the mechanics of flagellar motility. In this…

Fluid Dynamics · Physics 2014-05-07 Alan Cheng Hou Tsang , Eva Kanso

The design of artificial microswimmers is often inspired by the strategies of natural microorganisms. Many of these creatures exploit the fact that elasticity breaks the time-reversal symmetry of motion at low Reynolds numbers, but this…

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