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The most widely used internal measure for clustering evaluation is the silhouette coefficient, whose naive computation requires a quadratic number of distance calculations, which is clearly unfeasible for massive datasets. Surprisingly,…

Data Structures and Algorithms · Computer Science 2021-01-21 Federico Altieri , Andrea Pietracaprina , Geppino Pucci , Fabio Vandin

We present a meta-method for initializing (seeding) the $k$-means clustering algorithm called PNN-smoothing. It consists in splitting a given dataset into $J$ random subsets, clustering each of them individually, and merging the resulting…

Machine Learning · Computer Science 2022-12-12 Carlo Baldassi

In this paper, we develop a method for unsupervised clustering of two-way (matrix) data by combining two recent innovations from different fields: the Sparse Subspace Clustering (SSC) algorithm [10], which groups points coming from a union…

Machine Learning · Computer Science 2015-02-24 Eric Kernfeld , Shuchin Aeron , Misha Kilmer

We train three convolutional neural networks (CNNs) to classify galaxies with Galaxy Zoo 2 dataset and extract the activations from the last fully connected layer or the last average pooling layer of CNNs to study the high-dimensional…

Astrophysics of Galaxies · Physics 2018-07-17 Jia-Ming Dai , Jizhou Tong

The optimization of electric machines at multiple operating points is crucial for applications that require frequent changes on speeds and loads, such as the electric vehicles, to strive for the machine optimal performance across the entire…

Machine Learning · Computer Science 2019-11-05 Shen Zhang , Shibo Zhang , Sufei Li , Liang Du , Thomas G. Habetler

Multimodal relational data analysis has become of increasing importance in recent years, for exploring across different domains of data, such as images and their text tags obtained from social networking services (e.g., Flickr). A variety…

Machine Learning · Computer Science 2020-05-05 Morihiro Mizutani , Akifumi Okuno , Geewook Kim , Hidetoshi Shimodaira

Contrastive learning, especially self-supervised contrastive learning (SSCL), has achieved great success in extracting powerful features from unlabeled data. In this work, we contribute to the theoretical understanding of SSCL and uncover…

Machine Learning · Computer Science 2023-06-05 Tianyang Hu , Zhili Liu , Fengwei Zhou , Wenjia Wang , Weiran Huang

Scientific datasets often have hierarchical structure: for example, in surveys, individual participants (samples) might be grouped at a higher level (units) such as their geographical region. In these settings, the interest is often in…

Machine Learning · Computer Science 2024-06-06 Fynn Bachmann , Philipp Hennig , Dmitry Kobak

Dimensionality reduction techniques aim at representing high-dimensional data in low-dimensional spaces to extract hidden and useful information or facilitate visual understanding and interpretation of the data. However, few of them take…

Machine Learning · Computer Science 2022-10-25 Yan Sun , Yi Han , Jicong Fan

Multidimensional scaling is a statistical process that aims to embed high dimensional data into a lower-dimensional space; this process is often used for the purpose of data visualisation. Common multidimensional scaling algorithms tend to…

Machine Learning · Computer Science 2022-02-25 Pierre Lambert , Cyril de Bodt , Michel Verleysen , John Lee

Dimensionality reduction techniques are essential for visualizing and analyzing high-dimensional biological sequencing data. t-distributed Stochastic Neighbor Embedding (t-SNE) is widely used for this purpose, traditionally employing the…

Machine Learning · Computer Science 2025-12-19 Avais Jan , Prakash Chourasia , Sarwan Ali , Murray Patterson

This paper focuses on scalability and robustness of spectral clustering for extremely large-scale datasets with limited resources. Two novel algorithms are proposed, namely, ultra-scalable spectral clustering (U-SPEC) and ultra-scalable…

Machine Learning · Computer Science 2019-03-06 Dong Huang , Chang-Dong Wang , Jian-Sheng Wu , Jian-Huang Lai , Chee-Keong Kwoh

This work considers large-data asymptotics for t-distributed stochastic neighbor embedding (tSNE), a widely-used non-linear dimension reduction algorithm. We identify an appropriate continuum limit of the tSNE objective function, which can…

Statistics Theory · Mathematics 2024-10-18 Ryan Murray , Adam Pickarski

Non-linear dimensionality reduction can be performed by \textit{manifold learning} approaches, such as Stochastic Neighbour Embedding (SNE), Locally Linear Embedding (LLE) and Isometric Feature Mapping (ISOMAP). These methods aim to produce…

Machine Learning · Statistics 2021-12-09 Theodoulos Rodosthenous , Vahid Shahrezaei , Marina Evangelou

Semi-supervised clustering techniques have emerged as valuable tools for leveraging prior information in the form of constraints to improve the quality of clustering outcomes. Despite the proliferation of such methods, the ability to…

Machine Learning · Computer Science 2023-12-19 Guangjie Zeng , Hao Peng , Angsheng Li , Zhiwei Liu , Runze Yang , Chunyang Liu , Lifang He

Spectral clustering is a popular method for community detection in network graphs: starting from a matrix representation of the graph, the nodes are clustered on a low dimensional projection obtained from a truncated spectral decomposition…

Machine Learning · Statistics 2022-08-10 Francesco Sanna Passino , Nicholas A. Heard , Patrick Rubin-Delanchy

t-SNE remains one of the most popular embedding techniques for visualizing high-dimensional data. Most standard packages of t-SNE, such as scikit-learn, use the Barnes-Hut t-SNE (BH t-SNE) algorithm for large datasets. However, existing CPU…

Machine Learning · Computer Science 2022-12-23 Narendra Chaudhary , Alexander Pivovar , Pavel Yakovlev , Andrey Gorshkov , Sanchit Misra

Despite tremendous advancements in Artificial Intelligence, learning from large sets of data in an unsupervised manner remains a significant challenge. Classical clustering algorithms often fail to discover complex dependencies in large…

Machine Learning · Computer Science 2023-07-18 Adam Piróg , Halina Kwaśnicka

Network clustering reveals the organization of a network or corresponding complex system with elements represented as vertices and interactions as edges in a (directed, weighted) graph. Although the notion of clustering can be somewhat…

Machine Learning · Statistics 2017-11-15 Yongjin Park , Joel S. Bader

In the context of clustering, we assume a generative model where each cluster is the result of sampling points in the neighborhood of an embedded smooth surface; the sample may be contaminated with outliers, which are modeled as points…

Machine Learning · Statistics 2011-11-30 Ery Arias-Castro , Guangliang Chen , Gilad Lerman
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