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When designing new molecules with particular properties, it is not only important what to make but crucially how to make it. These instructions form a synthesis directed acyclic graph (DAG), describing how a large vocabulary of simple…

Machine Learning · Computer Science 2020-12-22 John Bradshaw , Brooks Paige , Matt J. Kusner , Marwin H. S. Segler , José Miguel Hernández-Lobato

The Jaccard index is an important similarity measure for item sets and Boolean data. On large datasets, an exact similarity computation is often infeasible for all item pairs both due to time and space constraints, giving rise to faster…

Data Structures and Algorithms · Computer Science 2021-03-09 Marc Bury , Chris Schwiegelshohn , Mara Sorella

The increasingly sophisticated environment in which attackers operate makes software security an even greater challenge in open-source projects, where malicious packages are prevalent. Static analysis tools, such as Malcontent, are highly…

Cryptography and Security · Computer Science 2026-01-27 Duc-Ly Vu , Thanh-Cong Nguyen , Minh-Khanh Vu , Ngoc-Thanh Nguyen , Kim-Anh Do Thi

The recent works on causal discovery have followed a similar trend of learning partial ancestral graphs (PAGs) since observational data constrain the true causal directed acyclic graph (DAG) only up to a Markov equivalence class. This…

Machine Learning · Computer Science 2026-03-03 Tingrui Huang , Devendra Singh Dhami

Process discovery is a family of techniques that helps to comprehend processes from their data footprints. Yet, as processes change over time so should their corresponding models, and failure to do so will lead to models that under- or…

Artificial Intelligence · Computer Science 2022-08-11 Andrea Burattin , Hugo A. López , Lasse Starklit

This proposal presents a graph computing framework intending to support both online and offline computing on large dynamic graphs efficiently. The framework proposes a new data model to support rich evolving vertex and edge data types. It…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-12-08 Zhao Yu Dong

Directed Acyclic Graphs (DAGs) are central to uncovering causal structure in complex systems, yet learning a single DAG from data is often challenging: model uncertainty, finite samples, and a combinatorially large search space frequently…

Methodology · Statistics 2026-05-19 Yunan Wu , Yue Wang , Chunlin Li , Chenglong Ye

Leveraging labelled data from multiple domains to enable prediction in another domain without labels is a significant, yet challenging problem. To address this problem, we introduce the framework DAPDAG (\textbf{D}omain \textbf{A}daptation…

Machine Learning · Computer Science 2022-08-03 Yanke Li , Hatt Tobias , Ioana Bica , Mihaela van der Schaar

We revisit existing linear computation coding (LCC) algorithms, and introduce a new framework that measures the computational cost of computing multidimensional linear functions, not only in terms of the number of additions, but also with…

Information Theory · Computer Science 2024-01-17 Hans Rosenberger , Ali Bereyhi , Ralf R. Müller

Major advancements in fields as diverse as biology and quantum computing have relied on a multitude of microscopic techniques. All optical, electron and scanning probe microscopy advanced with new detector technologies and integration of…

Instrumentation and Detectors · Physics 2023-03-01 Rama Vasudevan , Mani Valleti , Maxim Ziatdinov , Gerd Duscher , Suhas Somnath

A growing number of applications like probabilistic machine learning, sparse linear algebra, robotic navigation, etc., exhibit irregular data flow computation that can be modeled with directed acyclic graphs (DAGs). The irregularity arises…

Hardware Architecture · Computer Science 2022-10-25 Nimish Shah , Wannes Meert , Marian Verhelst

We propose causal preference elicitation, a Bayesian framework for expert-in-the-loop causal discovery that actively queries local edge relations to concentrate a posterior over directed acyclic graphs (DAGs). From any black-box…

Machine Learning · Computer Science 2026-02-03 Edwin V. Bonilla , He Zhao , Daniel M. Steinberg

Dynamic programming languages, such as PHP, JavaScript, and Python, provide built-in data structures including associative arrays and objects with similar semantics-object properties can be created at run-time and accessed via arbitrary…

Software Engineering · Computer Science 2014-05-07 David Hauzar , Jan Kofroň , Pavel Baštecký

Realistic environments for prototyping, studying and improving analysis workflows are a crucial element on the way towards user-friendly physics analysis at HL-LHC scale. The IRIS-HEP Analysis Grand Challenge (AGC) provides such an…

High Energy Physics - Experiment · Physics 2024-01-08 Alexander Held , Elliott Kauffman , Oksana Shadura , Andrew Wightman

Estimating the structure of directed acyclic graphs (DAGs) of features (variables) plays a vital role in revealing the latent data generation process and providing causal insights in various applications. Although there have been many…

Machine Learning · Computer Science 2024-03-06 Shaohua Fan , Shuyang Zhang , Xiao Wang , Chuan Shi

The feed-forward relationship naturally observed in time-dependent processes and in a diverse number of real systems -such as some food-webs and electronic and neural wiring- can be described in terms of so-called directed acyclic graphs…

Physics and Society · Physics 2015-05-19 Joaquín Goñi , Bernat Corominas-Murtra , Ricard V. Solé , Carlos Rodríguez-Caso

Dynamic Algorithm Configuration (DAC) aims to dynamically control a target algorithm's hyperparameters in order to improve its performance. Several theoretical and empirical results have demonstrated the benefits of dynamically controlling…

Artificial Intelligence · Computer Science 2021-12-07 Theresa Eimer , André Biedenkapp , Maximilian Reimer , Steven Adriaensen , Frank Hutter , Marius Lindauer

The yaglm package aims to make the broader ecosystem of modern generalized linear models accessible to data analysts and researchers. This ecosystem encompasses a range of loss functions (e.g. linear, logistic, quantile regression),…

Computation · Statistics 2021-10-13 Iain Carmichael , Thomas Keefe , Naomi Giertych , Jonathan P Williams

DAG-based protocols have been proposed as potential solutions to the latency and throughput limitations of traditional permissionless consensus protocols. However, their adoption has been hindered by security concerns and a lack of a solid…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-07 Ignacio Amores-Sesar , Christian Cachin

Memory retrieval in agentic large language model (LLM) systems is often treated as a static lookup problem, relying on flat vector search or fixed binary relational graphs. However, fixed graph structures cannot capture the varying…

Artificial Intelligence · Computer Science 2026-05-12 Dongming Jiang , Yi Li , Guanpeng Li , Qiannan Li , Bingzhe Li