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Much recent research has been conducted in the area of Bayesian learning, particularly with regard to the optimization of hyper-parameters via Gaussian process regression. The methodologies rely chiefly on the method of maximizing the…

Machine Learning · Statistics 2014-05-13 James Brofos

We argue that the present setting of semisupervised learning on graphs may result in unfair comparisons, due to its potential risk of over-tuning hyper-parameters for models. In this paper, we highlight the significant influence of tuning…

Machine Learning · Computer Science 2022-05-31 Ziang Li , Ming Ding , Weikai Li , Zihan Wang , Ziyu Zeng , Yukuo Cen , Jie Tang

Recent computational advances enable protein design pipelines to run end-to-end on GPUs, yet their heterogeneous computational behaviors remain undercharacterized at the system level. We implement and profile a representative pipeline at…

Emerging Technologies · Computer Science 2026-01-13 Jinwoo Hwang , Yeongmin Hwang , Tadiwos Meaza , Hyeonbin Bae , Jongse Park

General Purpose Graphic Processing Unit(GPGPU) is used widely for achieving high performance or high throughput in parallel programming. This capability of GPGPUs is very famous in the new era and mostly used for scientific computing which…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-10 Vajira Thambawita , Roshan G. Ragel , Dhammike Elkaduwe

We consider the problem of minimizing the makespan on batch processing identical machines, subject to compatibility constraints, where two jobs are compatible if they can be processed simultaneously in a same batch. These constraints are…

Discrete Mathematics · Computer Science 2023-09-07 Khaoula Bouakaz , Mourad Boudhar

We introduce in this paper, HeteroSTA, the first CPU-GPU heterogeneous timing analysis engine that efficiently supports: (1) a set of delay calculation models providing versatile accuracy-speed choices without relying on an external golden…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-18 Zizheng Guo , Haichuan Liu , Xizhe Shi , Shenglu Hua , Zuodong Zhang , Chunyuan Zhao , Runsheng Wang , Yibo Lin

Monte Carlo experiments produce samples in order to estimate features of a given distribution. However, simultaneous estimation of means and quantiles has received little attention, despite being common practice. In this setting we…

Computation · Statistics 2020-04-24 Nathan Robertson , James M. Flegal , Dootika Vats , Galin L. Jones

We present a mechanism to symbolically gather performance-relevant operation counts from numerically-oriented subprograms (`kernels') expressed in the Loopy programming system, and apply these counts in a simple, linear model of kernel run…

Performance · Computer Science 2016-04-19 James Stevens , Andreas Klöckner

Metrics of model goodness-of-fit, model comparison, and model parameter estimation are the main categories of statistical problems in science. Bayesian and frequentist methods that address these questions often rely on a likelihood…

Data Analysis, Statistics and Probability · Physics 2019-06-26 Carlos A. Argüelles , Austin Schneider , Tianlu Yuan

The use of computers in statistical physics is common because the sheer number of equations that describe the behavior of an entire system particle by particle often makes it impossible to solve them exactly. Monte Carlo methods form a…

Physics Education · Physics 2017-04-27 Matjaz Perc

The attention layer, a core component of Transformer-based LLMs, brings out inefficiencies in current GPU systems due to its low operational intensity and the substantial memory requirements of KV caches. We propose a High-bandwidth…

Hardware Architecture · Computer Science 2025-12-19 Myunghyun Rhee , Joonseop Sim , Taeyoung Ahn , Seungyong Lee , Daegun Yoon , Euiseok Kim , Kyoung Park , Youngpyo Joo , Hoshik Kim

A leading-order, leading-color parton-level event generator is developed for use on a multi-threaded GPU. Speed-up factors between 150 and 300 are obtained compared to an unoptimized CPU-based implementation of the event generator. In this…

High Energy Physics - Phenomenology · Physics 2011-07-14 Walter Giele , Gerben Stavenga , Jan-Christopher Winter

Graphics Processing Units (GPUs) are high performance co-processors originally intended to improve the use and quality of computer graphics applications. Once, researchers and practitioners noticed the potential of using GPU for general…

Numerical Analysis · Computer Science 2016-07-12 K. Parand , Saeed Zafarvahedian , Sayyed A. Hossayni

High-performance streams of (pseudo) random numbers are crucial for the efficient implementation for countless stochastic algorithms, most importantly, Monte Carlo simulations and molecular dynamics simulations with stochastic thermostats.…

Computational Physics · Physics 2012-08-30 Markus Manssen , Martin Weigel , Alexander K. Hartmann

Design of printed circuit board (PCB) stack-up requires the consideration of characteristic impedance, insertion loss and crosstalk. As there are many parameters in a PCB stack-up design, the optimization of these parameters needs to be…

Other Statistics · Statistics 2019-11-12 Jiayi He , Aravind Sampath Kumar , Arun Chada , Bhyrav Mutnury , James Drewniak

In recent years, it has become increasingly common for high performance computers (HPC) to possess some level of heterogeneous architecture - typically in the form of GPU accelerators. In some machines these are isolated within a dedicated…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-19 I. Zacharoudiou , J. W. S. McCullough , P. V. Coveney

Modern signal processing (SP) methods rely very heavily on probability and statistics to solve challenging SP problems. SP methods are now expected to deal with ever more complex models, requiring ever more sophisticated computational…

We introduce a class of algorithms, termed proximal interacting particle Langevin algorithms (PIPLA), for inference and learning in latent variable models whose joint probability density is non-differentiable. Leveraging proximal Markov…

Computation · Statistics 2025-05-30 Paula Cordero Encinar , Francesca R. Crucinio , O. Deniz Akyildiz

Heterogeneous computing integrates diverse processing elements, such as CPUs, GPUs, and FPGAs, within a single system, aiming to leverage the strengths of each architecture to optimize performance and energy consumption. In this context,…

Performance · Computer Science 2025-11-19 Maksymilian Graczyk , Vincent Desbiolles , Stefan Roiser , Andrea Guerrieri

We present a hardware-accelerated computation of Hasse-Weil invariants of all hyperelliptic curves of given genus over a fixed finite field. Our main motivation is the determination of traces of Frobenius on cohomology corresponding moduli…

Number Theory · Mathematics 2018-05-31 Martin Raum
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